Protein–RNA interactions for Protein: Q6P435

Putative uncharacterized SMG1-like protein, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q6P435 MIR4303-201ENST00000581299 66 ntBASIC1.16□□□□□ -2.22
Q6P435 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.16□□□□□ -2.22
Q6P435 AL359075.3-201ENST00000613288 217 ntBASIC1.16□□□□□ -2.22
Q6P435 MIR7974-201ENST00000615835 79 ntBASIC1.16□□□□□ -2.22
Q6P435 7SK.10-201ENST00000621414 298 ntBASIC1.16□□□□□ -2.22
Q6P435 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.16□□□□□ -2.22
Q6P435 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Q6P435 AL391987.6-201ENST00000305671 199 ntBASIC1.15□□□□□ -2.23
Q6P435 RNU1-17P-201ENST00000363022 152 ntBASIC1.15□□□□□ -2.23
Q6P435 RNU6-112P-201ENST00000363599 104 ntBASIC1.15□□□□□ -2.23
Q6P435 Y_RNA.193-201ENST00000363979 102 ntBASIC1.15□□□□□ -2.23
Q6P435 RNU6-1019P-201ENST00000364424 107 ntBASIC1.15□□□□□ -2.23
Q6P435 Y_RNA.310-201ENST00000365063 113 ntBASIC1.15□□□□□ -2.23
Q6P435 Y_RNA.518-201ENST00000384552 113 ntBASIC1.15□□□□□ -2.23
Q6P435 RNU6-296P-201ENST00000384608 107 ntBASIC1.15□□□□□ -2.23
Q6P435 RNU6-136P-201ENST00000384663 107 ntBASIC1.15□□□□□ -2.23
Q6P435 MIR515-2-201ENST00000384883 83 ntBASIC1.15□□□□□ -2.23
Q6P435 MIR515-1-201ENST00000384884 83 ntBASIC1.15□□□□□ -2.23
Q6P435 RNA5SP323-201ENST00000391094 133 ntBASIC1.15□□□□□ -2.23
Q6P435 RNA5SP511-201ENST00000410487 115 ntBASIC1.15□□□□□ -2.23
Q6P435 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.15□□□□□ -2.23
Q6P435 AL606517.2-201ENST00000442855 241 ntBASIC1.15□□□□□ -2.23
Q6P435 SNORD127-201ENST00000458892 86 ntBASIC1.15□□□□□ -2.23
Q6P435 RPS26P45-201ENST00000471748 340 ntBASIC1.15□□□□□ -2.23
Q6P435 AC008834.1-201ENST00000511612 175 ntBASIC1.15□□□□□ -2.23
Q6P435 SERF1AP1-201ENST00000514575 187 ntBASIC1.15□□□□□ -2.23
Q6P435 Y_RNA.668-201ENST00000516233 93 ntBASIC1.15□□□□□ -2.23
Q6P435 AC024995.1-201ENST00000523014 93 ntBASIC1.15□□□□□ -2.23
Q6P435 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.15□□□□□ -2.23
Q6P435 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Q6P435 AL160236.1-201ENST00000556317 195 ntBASIC1.15□□□□□ -2.23
Q6P435 AC073413.2-201ENST00000604332 360 ntBASIC1.15□□□□□ -2.23
Q6P435 AC069114.2-201ENST00000604699 304 ntBASIC1.15□□□□□ -2.23
Q6P435 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.15□□□□□ -2.23
Q6P435 U4.1-201ENST00000620349 87 ntBASIC1.15□□□□□ -2.23
Q6P435 U1.36-201ENST00000620684 176 ntBASIC1.15□□□□□ -2.23
Q6P435 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.15□□□□□ -2.23
Q6P435 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Q6P435 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
Q6P435 MIR335-201ENST00000362173 94 ntBASIC1.14□□□□□ -2.23
Q6P435 RNU6-801P-201ENST00000364087 105 ntBASIC1.14□□□□□ -2.23
Q6P435 Y_RNA.341-201ENST00000365341 102 ntBASIC1.14□□□□□ -2.23
Q6P435 Y_RNA.368-201ENST00000365547 113 ntBASIC1.14□□□□□ -2.23
Q6P435 Y_RNA.452-201ENST00000384202 108 ntBASIC1.14□□□□□ -2.23
Q6P435 Y_RNA.556-201ENST00000384677 113 ntBASIC1.14□□□□□ -2.23
Q6P435 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
Q6P435 SNORA53-201ENST00000391141 249 ntBASIC1.14□□□□□ -2.23
Q6P435 MIR934-201ENST00000401241 83 ntBASIC1.14□□□□□ -2.23
Q6P435 RNU6-855P-201ENST00000410395 104 ntBASIC1.14□□□□□ -2.23
Q6P435 RNU6-710P-201ENST00000410424 105 ntBASIC1.14□□□□□ -2.23
Q6P435 RNU2-38P-201ENST00000410856 79 ntBASIC1.14□□□□□ -2.23
Q6P435 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.14□□□□□ -2.23
Q6P435 AL591806.2-201ENST00000433122 173 ntBASIC1.14□□□□□ -2.23
Q6P435 RPS27P1-201ENST00000450552 247 ntBASIC1.14□□□□□ -2.23
Q6P435 RPS20P10-201ENST00000451209 253 ntBASIC1.14□□□□□ -2.23
Q6P435 AC091959.1-201ENST00000495857 238 ntBASIC1.14□□□□□ -2.23
Q6P435 MIR4713-201ENST00000582691 75 ntBASIC1.14□□□□□ -2.23
Q6P435 MIR3149-201ENST00000584629 83 ntBASIC1.14□□□□□ -2.23
Q6P435 AC012433.1-201ENST00000588916 398 ntBASIC1.14□□□□□ -2.23
Q6P435 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.14□□□□□ -2.23
Q6P435 AC022217.4-201ENST00000604389 163 ntBASIC1.14□□□□□ -2.23
Q6P435 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.14□□□□□ -2.23
Q6P435 AC004832.4-201ENST00000608952 331 ntBASIC1.14□□□□□ -2.23
Q6P435 SNORA25.1-201ENST00000362326 128 ntBASIC1.13□□□□□ -2.23
Q6P435 RNU6-457P-201ENST00000363999 107 ntBASIC1.13□□□□□ -2.23
Q6P435 SNORA63D-201ENST00000364359 132 ntBASIC1.13□□□□□ -2.23
Q6P435 Y_RNA.288-201ENST00000364854 92 ntBASIC1.13□□□□□ -2.23
Q6P435 Y_RNA.456-201ENST00000384232 111 ntBASIC1.13□□□□□ -2.23
Q6P435 RNU6-376P-201ENST00000384731 106 ntBASIC1.13□□□□□ -2.23
Q6P435 MIR764-201ENST00000390811 85 ntBASIC1.13□□□□□ -2.23
Q6P435 RNA5SP109-201ENST00000391010 116 ntBASIC1.13□□□□□ -2.23
Q6P435 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.13□□□□□ -2.23
Q6P435 SNORA11.2-201ENST00000408318 127 ntBASIC1.13□□□□□ -2.23
Q6P435 RNU2-14P-201ENST00000411053 191 ntBASIC1.13□□□□□ -2.23
Q6P435 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.13□□□□□ -2.23
Q6P435 AC024067.1-201ENST00000426199 223 ntBASIC1.13□□□□□ -2.23
Q6P435 AL162725.1-201ENST00000435405 301 ntBASIC1.13□□□□□ -2.23
Q6P435 HSPE1P21-201ENST00000438283 308 ntBASIC1.13□□□□□ -2.23
Q6P435 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.13□□□□□ -2.23
Q6P435 RNU6-1132P-201ENST00000459214 107 ntBASIC1.13□□□□□ -2.23
Q6P435 AC091021.1-201ENST00000468051 388 ntBASIC1.13□□□□□ -2.23
Q6P435 RNU6-1278P-201ENST00000516130 107 ntBASIC1.13□□□□□ -2.23
Q6P435 SNORA27.4-201ENST00000516650 95 ntBASIC1.13□□□□□ -2.23
Q6P435 RNA5SP437-201ENST00000517249 129 ntBASIC1.13□□□□□ -2.23
Q6P435 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.13□□□□□ -2.23
Q6P435 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
Q6P435 MIR3198-2-201ENST00000577868 80 ntBASIC1.13□□□□□ -2.23
Q6P435 MIR4285-201ENST00000581001 85 ntBASIC1.13□□□□□ -2.23
Q6P435 AC091178.2-201ENST00000584401 117 ntBASIC1.13□□□□□ -2.23
Q6P435 AC037487.3-201ENST00000606668 112 ntBASIC1.13□□□□□ -2.23
Q6P435 MIR6079-201ENST00000635807 62 ntBASIC1.13□□□□□ -2.23
Q6P435 U6.104-201ENST00000637979 90 ntBASIC1.13□□□□□ -2.23
Q6P435 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Q6P435 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
Q6P435 AC018630.2-201ENST00000534866 2403 ntBASIC1.13□□□□□ -2.23
Q6P435 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.12□□□□□ -2.23
Q6P435 Y_RNA.14-201ENST00000362415 103 ntBASIC1.12□□□□□ -2.23
Q6P435 RNU6-1048P-201ENST00000364054 107 ntBASIC1.12□□□□□ -2.23
Q6P435 RNU6-702P-201ENST00000364982 107 ntBASIC1.12□□□□□ -2.23
Q6P435 RNU6-203P-201ENST00000384038 104 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms