Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-1240P-201ENST00000365155 104 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 SNORD50.2-201ENST00000365465 70 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 MIR613-201ENST00000385248 95 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 EBAG9P1-201ENST00000418955 543 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 AC008134.1-201ENST00000420943 193 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 AC005840.1-201ENST00000498412 377 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 RNU6-561P-201ENST00000516222 102 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 RNU6-1007P-201ENST00000516586 107 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 RNU7-121P-201ENST00000516604 62 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 SNORA31.15-201ENST00000516771 132 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.61□□□□□ -1.99
KRT40Q6A162 AC005972.2-201ENST00000604690 348 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 U2.20-201ENST00000613956 192 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 AC006435.5-201ENST00000624486 112 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 AC132825.6-201ENST00000638861 357 ntBASIC2.61□□□□□ -1.99
KRT40Q6A162 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRT40Q6A162 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
KRT40Q6A162 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRT40Q6A162 RNU1-22P-201ENST00000363334 158 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 RNA5SP240-201ENST00000365355 128 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.6□□□□□ -1.99
KRT40Q6A162 RNU6-144P-201ENST00000383951 107 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 MIR627-201ENST00000384979 97 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 AC060773.1-201ENST00000421698 310 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 TMSB4XP3-201ENST00000445144 114 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 SNORD116-25-201ENST00000516517 92 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 RNU6-667P-201ENST00000517186 102 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 MIR4431-201ENST00000579990 94 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 MIR5688-201ENST00000580619 83 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 POLR3GP1-201ENST00000594073 261 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 AL355297.2-201ENST00000604792 129 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 AL391903.3-201ENST00000612158 163 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
KRT40Q6A162 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KRT40Q6A162 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -1.99
KRT40Q6A162 Y_RNA.118-201ENST00000363300 101 ntBASIC2.59□□□□□ -1.99
KRT40Q6A162 RNU6-131P-201ENST00000391144 107 ntBASIC2.59□□□□□ -1.99
KRT40Q6A162 AL162725.1-201ENST00000435405 301 ntBASIC2.59□□□□□ -1.99
KRT40Q6A162 RPS27P22-201ENST00000478056 241 ntBASIC2.59□□□□□ -1.99
KRT40Q6A162 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.59□□□□□ -1.99
KRT40Q6A162 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.59□□□□□ -1.99
KRT40Q6A162 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.59□□□□□ -1.99
KRT40Q6A162 MIR4724-201ENST00000579485 89 ntBASIC2.59□□□□□ -1.99
KRT40Q6A162 MIR3117-201ENST00000584034 78 ntBASIC2.59□□□□□ -1.99
KRT40Q6A162 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.59□□□□□ -2
KRT40Q6A162 MIR367-201ENST00000362299 68 ntBASIC2.58□□□□□ -2
KRT40Q6A162 RNU6-449P-201ENST00000383914 107 ntBASIC2.58□□□□□ -2
KRT40Q6A162 RNU6-239P-201ENST00000390990 99 ntBASIC2.58□□□□□ -2
KRT40Q6A162 MIR1287-201ENST00000408492 90 ntBASIC2.58□□□□□ -2
KRT40Q6A162 RNU2-63P-201ENST00000410792 194 ntBASIC2.58□□□□□ -2
KRT40Q6A162 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.58□□□□□ -2
KRT40Q6A162 AC097462.1-201ENST00000514125 324 ntBASIC2.58□□□□□ -2
KRT40Q6A162 AL049779.4-201ENST00000604500 156 ntBASIC2.58□□□□□ -2
KRT40Q6A162 MIR6873-201ENST00000622788 63 ntBASIC2.58□□□□□ -2
KRT40Q6A162 MTND1P7-201ENST00000632801 297 ntBASIC2.58□□□□□ -2
KRT40Q6A162 MIR3658-201ENST00000636291 56 ntBASIC2.58□□□□□ -2
KRT40Q6A162 CENPCP1-201ENST00000533085 2578 ntBASIC2.58□□□□□ -2
KRT40Q6A162 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KRT40Q6A162 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRT40Q6A162 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.58□□□□□ -2
KRT40Q6A162 Y_RNA.357-201ENST00000365487 109 ntBASIC2.57□□□□□ -2
KRT40Q6A162 Y_RNA.400-201ENST00000383963 111 ntBASIC2.57□□□□□ -2
KRT40Q6A162 RNU6-136P-201ENST00000384663 107 ntBASIC2.57□□□□□ -2
KRT40Q6A162 SNORA64-201ENST00000384674 134 ntBASIC2.57□□□□□ -2
KRT40Q6A162 MIR221-201ENST00000385135 110 ntBASIC2.57□□□□□ -2
KRT40Q6A162 AL606845.1-201ENST00000404881 255 ntBASIC2.57□□□□□ -2
KRT40Q6A162 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.57□□□□□ -2
KRT40Q6A162 RPL23AP54-201ENST00000495129 419 ntBASIC2.57□□□□□ -2
KRT40Q6A162 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.57□□□□□ -2
KRT40Q6A162 MIR4438-201ENST00000585271 93 ntBASIC2.57□□□□□ -2
KRT40Q6A162 ZNF720P1-201ENST00000562403 1939 ntBASIC2.56□□□□□ -2
KRT40Q6A162 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
KRT40Q6A162 SNORA25B-201ENST00000365507 128 ntBASIC2.56□□□□□ -2
KRT40Q6A162 SNORA67.3-201ENST00000384366 140 ntBASIC2.56□□□□□ -2
KRT40Q6A162 MIR561-201ENST00000385216 97 ntBASIC2.56□□□□□ -2
KRT40Q6A162 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
KRT40Q6A162 HMGN2P34-201ENST00000437647 269 ntBASIC2.56□□□□□ -2
KRT40Q6A162 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
KRT40Q6A162 RPS4XP11-201ENST00000446897 772 ntBASIC2.56□□□□□ -2
KRT40Q6A162 RNU6-437P-201ENST00000459408 95 ntBASIC2.56□□□□□ -2
KRT40Q6A162 RNU7-116P-201ENST00000516940 62 ntBASIC2.56□□□□□ -2
KRT40Q6A162 RNU7-128P-201ENST00000517247 62 ntBASIC2.56□□□□□ -2
KRT40Q6A162 AL929325.1-201ENST00000603096 117 ntBASIC2.56□□□□□ -2
KRT40Q6A162 AL021707.8-201ENST00000609428 183 ntBASIC2.56□□□□□ -2
KRT40Q6A162 Y_RNA.778-201ENST00000620203 90 ntBASIC2.56□□□□□ -2
KRT40Q6A162 AC009831.4-201ENST00000620744 325 ntBASIC2.56□□□□□ -2
KRT40Q6A162 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
KRT40Q6A162 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
KRT40Q6A162 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
KRT40Q6A162 RNU6-674P-201ENST00000363831 107 ntBASIC2.55□□□□□ -2
KRT40Q6A162 RNU6-151P-201ENST00000364158 107 ntBASIC2.55□□□□□ -2
KRT40Q6A162 Y_RNA.215-201ENST00000364204 112 ntBASIC2.55□□□□□ -2
KRT40Q6A162 SNORD114-6-201ENST00000364393 72 ntBASIC2.55□□□□□ -2
KRT40Q6A162 RNU6-81P-201ENST00000365608 104 ntBASIC2.55□□□□□ -2
KRT40Q6A162 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRT40Q6A162 MIR569-201ENST00000385228 96 ntBASIC2.55□□□□□ -2
KRT40Q6A162 RN7SKP101-201ENST00000411376 320 ntBASIC2.55□□□□□ -2
KRT40Q6A162 AL606753.1-201ENST00000427435 87 ntBASIC2.55□□□□□ -2
KRT40Q6A162 AC104435.1-201ENST00000483483 166 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms