Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 HMGN2P5-201ENST00000436882 273 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 SEPT7P4-201ENST00000437076 306 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 MTND2P29-201ENST00000438595 412 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 AL121914.1-201ENST00000450188 156 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 SNORD11-201ENST00000459124 84 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 RNA5SP356-201ENST00000515972 94 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 RNU7-28P-201ENST00000516759 62 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 MIR4529-201ENST00000578110 78 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 MIR3144-201ENST00000579460 79 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 AC078899.2-201ENST00000595282 212 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 U1.36-201ENST00000620684 176 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 MTND1P7-201ENST00000632801 297 ntBASIC2.85□□□□□ -1.95
ZNF394Q53GI3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF394Q53GI3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF394Q53GI3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF394Q53GI3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ZNF394Q53GI3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.84□□□□□ -1.95
ZNF394Q53GI3 RNU6-950P-201ENST00000384651 107 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 MIR524-201ENST00000385242 87 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 MT-TT-201ENST00000387460 66 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 RNU6-239P-201ENST00000390990 99 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 AC004486.1-201ENST00000546846 233 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.84□□□□□ -1.95
ZNF394Q53GI3 MIR4319-201ENST00000577285 85 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 MIR4662B-201ENST00000579498 81 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 AC087685.1-201ENST00000587507 141 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 uc_338.4-201ENST00000616635 176 ntBASIC2.84□□□□□ -1.95
ZNF394Q53GI3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.84□□□□□ -1.95
ZNF394Q53GI3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.84□□□□□ -1.95
ZNF394Q53GI3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
ZNF394Q53GI3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF394Q53GI3 Y_RNA.253-201ENST00000364562 112 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 RNY1P5-201ENST00000383890 115 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 RNU6-1080P-201ENST00000383982 107 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 AC245047.3-201ENST00000429428 127 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 AC108938.1-201ENST00000451204 136 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 AL049830.1-201ENST00000468034 425 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 TRBV12-1-201ENST00000479785 344 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 AC084364.2-201ENST00000546924 395 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.83□□□□□ -1.96
ZNF394Q53GI3 AL160236.1-201ENST00000556317 195 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 MIR5094-201ENST00000578766 85 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 CTSLP2-204ENST00000629029 392 ntBASIC2.83□□□□□ -1.96
ZNF394Q53GI3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ZNF394Q53GI3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
ZNF394Q53GI3 RNU6-643P-201ENST00000384018 107 ntBASIC2.82□□□□□ -1.96
ZNF394Q53GI3 MIR9-1-201ENST00000385198 89 ntBASIC2.82□□□□□ -1.96
ZNF394Q53GI3 SNORD77.4-201ENST00000516158 81 ntBASIC2.82□□□□□ -1.96
ZNF394Q53GI3 Y_RNA.703-201ENST00000516846 111 ntBASIC2.82□□□□□ -1.96
ZNF394Q53GI3 RNU6-255P-201ENST00000516957 105 ntBASIC2.82□□□□□ -1.96
ZNF394Q53GI3 AC022217.4-201ENST00000604389 163 ntBASIC2.82□□□□□ -1.96
ZNF394Q53GI3 AC012640.5-201ENST00000623897 319 ntBASIC2.82□□□□□ -1.96
ZNF394Q53GI3 SNORA1B-201ENST00000362535 133 ntBASIC2.81□□□□□ -1.96
ZNF394Q53GI3 RNA5SP210-201ENST00000391034 120 ntBASIC2.81□□□□□ -1.96
ZNF394Q53GI3 SNORA26-201ENST00000391286 122 ntBASIC2.81□□□□□ -1.96
ZNF394Q53GI3 SNRPGP10-201ENST00000432323 225 ntBASIC2.81□□□□□ -1.96
ZNF394Q53GI3 SNORA31.25-201ENST00000517242 134 ntBASIC2.81□□□□□ -1.96
ZNF394Q53GI3 AL049861.1-201ENST00000603130 150 ntBASIC2.81□□□□□ -1.96
ZNF394Q53GI3 RNU6-859P-201ENST00000362728 107 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 SNORA3A-201ENST00000364113 130 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 Y_RNA.432-201ENST00000384087 111 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 RNA5SP482-201ENST00000391269 118 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 AC245047.4-201ENST00000433189 144 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF394Q53GI3 RPS27P1-201ENST00000450552 247 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF394Q53GI3 SNORA59A-201ENST00000459326 152 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 RNU6-1299P-201ENST00000516316 100 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 MIR3670-2-201ENST00000582974 65 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 MIR3670-1-201ENST00000584160 65 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 MIR3670-3-201ENST00000584855 65 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 SNORA28-201ENST00000606769 126 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 AC104465.1-201ENST00000611365 139 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 MIR3670-4-201ENST00000612260 65 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 AC245884.12-201ENST00000615364 59 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 AC021753.1-201ENST00000635724 168 ntBASIC2.8□□□□□ -1.96
ZNF394Q53GI3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ZNF394Q53GI3 AC062016.1-201ENST00000355719 319 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 Y_RNA.170-201ENST00000363746 110 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 SNORD45.3-201ENST00000363836 72 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 SNORA63D-201ENST00000364359 132 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 RNU6-449P-201ENST00000383914 107 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 RNU6-804P-201ENST00000384286 107 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 SNORA11.2-201ENST00000408318 127 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.79□□□□□ -1.96
ZNF394Q53GI3 OR9P1P-201ENST00000496431 281 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 RNA5SP153-201ENST00000516498 76 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 RNU7-121P-201ENST00000516604 62 ntBASIC2.79□□□□□ -1.96
ZNF394Q53GI3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.79□□□□□ -1.96
ZNF394Q53GI3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZNF394Q53GI3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.79□□□□□ -1.96
ZNF394Q53GI3 MIR196B-201ENST00000384852 84 ntBASIC2.78□□□□□ -1.96
ZNF394Q53GI3 MIR520A-201ENST00000384862 85 ntBASIC2.78□□□□□ -1.96
ZNF394Q53GI3 AC096725.1-201ENST00000514266 313 ntBASIC2.78□□□□□ -1.96
ZNF394Q53GI3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms