Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTPN5P54829 SNORD74.4-201ENST00000364129 80 ntBASIC4□□□□□ -1.77
PTPN5P54829 Y_RNA.336-201ENST00000365307 109 ntBASIC4□□□□□ -1.77
PTPN5P54829 Y_RNA.494-201ENST00000384432 111 ntBASIC4□□□□□ -1.77
PTPN5P54829 MIR1253-201ENST00000408273 105 ntBASIC4□□□□□ -1.77
PTPN5P54829 RNA5SP120-201ENST00000410900 112 ntBASIC4□□□□□ -1.77
PTPN5P54829 AL135938.1-201ENST00000443141 297 ntBASIC4□□□□□ -1.77
PTPN5P54829 RNU1-98P-201ENST00000458992 160 ntBASIC4□□□□□ -1.77
PTPN5P54829 AL049830.1-201ENST00000468034 425 ntBASIC4□□□□□ -1.77
PTPN5P54829 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4□□□□□ -1.77
PTPN5P54829 AC007536.1-201ENST00000533382 349 ntBASIC4□□□□□ -1.77
PTPN5P54829 uc_338.14-201ENST00000613162 166 ntBASIC4□□□□□ -1.77
PTPN5P54829 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN5P54829 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4□□□□□ -1.77
PTPN5P54829 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4□□□□□ -1.77
PTPN5P54829 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
PTPN5P54829 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTPN5P54829 SPATA31D2P-201ENST00000429999 4388 ntBASIC4□□□□□ -1.77
PTPN5P54829 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4□□□□□ -1.77
PTPN5P54829 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN5P54829 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PTPN5P54829 SNORA1B-201ENST00000362535 133 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 RNU6-686P-201ENST00000364839 107 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 snoU2-30.1-201ENST00000365012 70 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 RNU6-499P-201ENST00000365615 107 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 RNU6-1274P-201ENST00000384557 107 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 MIR1236-201ENST00000408340 102 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN5P54829 AC107083.1-201ENST00000439643 279 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 AC087499.7-201ENST00000441958 109 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 AL109933.2-201ENST00000452651 260 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 RNA5SP468-201ENST00000516782 93 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 RNU6-856P-201ENST00000516959 98 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPN5P54829 AC090517.3-201ENST00000625170 141 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPN5P54829 U6.108-201ENST00000637764 58 ntBASIC3.99□□□□□ -1.77
PTPN5P54829 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.99□□□□□ -1.77
PTPN5P54829 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PTPN5P54829 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PTPN5P54829 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN5P54829 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
PTPN5P54829 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PTPN5P54829 MIR34C-201ENST00000384831 77 ntBASIC3.98□□□□□ -1.77
PTPN5P54829 AC097463.2-201ENST00000421074 142 ntBASIC3.98□□□□□ -1.77
PTPN5P54829 AC083863.1-201ENST00000438811 231 ntBASIC3.98□□□□□ -1.77
PTPN5P54829 HMGN2P18-201ENST00000450680 270 ntBASIC3.98□□□□□ -1.77
PTPN5P54829 HMGN2P7-201ENST00000456186 273 ntBASIC3.98□□□□□ -1.77
PTPN5P54829 SNORD45.4-201ENST00000516629 73 ntBASIC3.98□□□□□ -1.77
PTPN5P54829 RNA5SP179-201ENST00000517284 121 ntBASIC3.98□□□□□ -1.77
PTPN5P54829 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN5P54829 AC006504.1-201ENST00000562493 3666 ntBASIC3.98□□□□□ -1.77
PTPN5P54829 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN5P54829 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTPN5P54829 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN5P54829 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PTPN5P54829 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTPN5P54829 RNA5SP189-201ENST00000364920 115 ntBASIC3.97□□□□□ -1.77
PTPN5P54829 RNU6-540P-201ENST00000384622 101 ntBASIC3.97□□□□□ -1.77
PTPN5P54829 RNU6-1307P-201ENST00000391012 103 ntBASIC3.97□□□□□ -1.77
PTPN5P54829 AC060773.1-201ENST00000421698 310 ntBASIC3.97□□□□□ -1.77
PTPN5P54829 HMGN2P34-201ENST00000437647 269 ntBASIC3.97□□□□□ -1.77
PTPN5P54829 RNU7-45P-201ENST00000459460 63 ntBASIC3.97□□□□□ -1.77
PTPN5P54829 RNU7-2P-201ENST00000516096 62 ntBASIC3.97□□□□□ -1.77
PTPN5P54829 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.97□□□□□ -1.77
PTPN5P54829 MIR5187-201ENST00000583479 76 ntBASIC3.97□□□□□ -1.77
PTPN5P54829 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.97□□□□□ -1.77
PTPN5P54829 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
PTPN5P54829 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PTPN5P54829 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PTPN5P54829 AL442644.1-201ENST00000454390 3105 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 IPO8P1-201ENST00000455509 3109 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PTPN5P54829 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
PTPN5P54829 RNU6-1084P-201ENST00000362498 107 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 Y_RNA.532-201ENST00000384590 113 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 MIR548G-201ENST00000408442 89 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 RNU2-37P-201ENST00000410695 177 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.96□□□□□ -1.78
PTPN5P54829 AC078918.1-201ENST00000498515 228 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 RPPH1-2P-201ENST00000516688 293 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 AP002004.2-201ENST00000531656 154 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 YPEL5P3-201ENST00000547227 352 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 EIF4BP1-201ENST00000554881 351 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 AC091167.4-201ENST00000605079 184 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 AC103810.6-201ENST00000606708 136 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 MIR4727-201ENST00000622232 55 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 U6.111-201ENST00000636093 83 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN5P54829 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.96□□□□□ -1.78
PTPN5P54829 ZNF962P-201ENST00000443465 3140 ntBASIC3.96□□□□□ -1.78
PTPN5P54829 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN5P54829 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTPN5P54829 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN5P54829 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN5P54829 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PTPN5P54829 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPN5P54829 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.95□□□□□ -1.78
PTPN5P54829 SNORA63.2-201ENST00000362603 126 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms