Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SLC6A11P48066 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SLC6A11P48066 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SLC6A11P48066 Y_RNA.127-201ENST00000363386 109 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 RNU6-597P-201ENST00000365620 102 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 SNORD116-14-201ENST00000383894 92 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 SNORD116-17-201ENST00000383929 92 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 SNORD116-15-201ENST00000384445 92 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 SNORD116-19-201ENST00000384729 92 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SLC6A11P48066 RNA5SP467-201ENST00000391274 118 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 MIR1261-201ENST00000408659 82 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 EDDM3CP-201ENST00000415977 425 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 AC092427.1-202ENST00000430569 476 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 AC245047.4-201ENST00000433189 144 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 SNORD11-201ENST00000459124 84 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 TRBV12-1-201ENST00000479785 344 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 RNU6-1291P-201ENST00000516591 104 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 AL359881.1-201ENST00000602916 267 ntBASIC2.7□□□□□ -1.98
SLC6A11P48066 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.7□□□□□ -1.98
SLC6A11P48066 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SLC6A11P48066 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SLC6A11P48066 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.69□□□□□ -1.98
SLC6A11P48066 Y_RNA.91-201ENST00000363042 107 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 SNORA25.7-201ENST00000364375 127 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 RNU6-915P-201ENST00000364943 103 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 SNORA67.4-201ENST00000384688 142 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 Y_RNA.584-201ENST00000391090 114 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 RNA5SP344-201ENST00000411081 104 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 AL445687.1-201ENST00000439946 251 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 AC009238.1-201ENST00000442165 424 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC6A11P48066 AC009237.6-201ENST00000446969 424 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 SNORD77.4-201ENST00000516158 81 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 AL359075.3-201ENST00000613288 217 ntBASIC2.69□□□□□ -1.98
SLC6A11P48066 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SLC6A11P48066 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SLC6A11P48066 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A11P48066 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A11P48066 Y_RNA.267-201ENST00000364679 109 ntBASIC2.68□□□□□ -1.98
SLC6A11P48066 RNA5SP323-201ENST00000391094 133 ntBASIC2.68□□□□□ -1.98
SLC6A11P48066 SRIP3-201ENST00000413200 219 ntBASIC2.68□□□□□ -1.98
SLC6A11P48066 YWHAEP4-201ENST00000505390 198 ntBASIC2.68□□□□□ -1.98
SLC6A11P48066 RNU7-99P-201ENST00000516271 62 ntBASIC2.68□□□□□ -1.98
SLC6A11P48066 RNA5SP76-201ENST00000516277 87 ntBASIC2.68□□□□□ -1.98
SLC6A11P48066 RNU7-149P-201ENST00000516739 59 ntBASIC2.68□□□□□ -1.98
SLC6A11P48066 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A11P48066 MIR3605-201ENST00000583214 100 ntBASIC2.68□□□□□ -1.98
SLC6A11P48066 Pinc.1-201ENST00000616452 154 ntBASIC2.68□□□□□ -1.98
SLC6A11P48066 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC6A11P48066 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC6A11P48066 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.67□□□□□ -1.98
SLC6A11P48066 Y_RNA.99-201ENST00000363138 105 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 RNU1-96P-201ENST00000364163 162 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 RNU6-978P-201ENST00000364371 103 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 RNA5SP205-201ENST00000364653 136 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 Y_RNA.634-201ENST00000364811 113 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 RNU6-1072P-201ENST00000384703 107 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 RNU6-443P-201ENST00000384780 107 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 AL590004.2-201ENST00000404787 371 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.67□□□□□ -1.98
SLC6A11P48066 OR9P1P-201ENST00000496431 281 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.67□□□□□ -1.98
SLC6A11P48066 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 U7.2-201ENST00000607576 63 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 MIR338-201ENST00000636369 67 ntBASIC2.67□□□□□ -1.98
SLC6A11P48066 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SLC6A11P48066 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
SLC6A11P48066 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SLC6A11P48066 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SLC6A11P48066 SNORA33-201ENST00000363664 130 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 SNORD114-6-201ENST00000364393 72 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 Y_RNA.251-201ENST00000364551 99 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 RNU6-80P-201ENST00000384195 107 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 RNU6-160P-201ENST00000384591 107 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 MIR562-201ENST00000384894 95 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 RNU11-5P-201ENST00000391216 129 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 Y_RNA.629-201ENST00000411368 105 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
SLC6A11P48066 AL353689.1-201ENST00000438895 199 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 ATP5J2P3-201ENST00000451550 258 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 RNA5SP153-201ENST00000516498 76 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 RNU1-142P-201ENST00000516682 145 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 RNU7-128P-201ENST00000517247 62 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 AC007536.1-201ENST00000533382 349 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.66□□□□□ -1.98
SLC6A11P48066 AP001340.1-201ENST00000624405 217 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
SLC6A11P48066 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SLC6A11P48066 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SLC6A11P48066 SNORA12.1-201ENST00000390873 148 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 MIR887-201ENST00000401258 79 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 MIR1262-201ENST00000408276 93 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.65□□□□□ -1.99
SLC6A11P48066 RNU4-57P-201ENST00000515980 135 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 RNA5SP320-201ENST00000516263 124 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 RNA5SP282-201ENST00000516355 108 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 SNORA9.3-201ENST00000516383 129 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 Y_RNA.686-201ENST00000516548 134 ntBASIC2.65□□□□□ -1.99
SLC6A11P48066 AL160236.1-201ENST00000556317 195 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms