Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 AL591806.2-201ENST00000433122 173 ntBASIC1.67□□□□□ -2.14
MSH3P20585 RPS20P10-201ENST00000451209 253 ntBASIC1.67□□□□□ -2.14
MSH3P20585 RNA5SP57-201ENST00000459463 123 ntBASIC1.67□□□□□ -2.14
MSH3P20585 RPL36AP21-201ENST00000490372 323 ntBASIC1.67□□□□□ -2.14
MSH3P20585 RNU6-1278P-201ENST00000516130 107 ntBASIC1.67□□□□□ -2.14
MSH3P20585 AC136628.3-201ENST00000521868 290 ntBASIC1.67□□□□□ -2.14
MSH3P20585 AC073413.2-201ENST00000604332 360 ntBASIC1.67□□□□□ -2.14
MSH3P20585 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
MSH3P20585 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
MSH3P20585 SNORA25.1-201ENST00000362326 128 ntBASIC1.66□□□□□ -2.14
MSH3P20585 RNU6-112P-201ENST00000363599 104 ntBASIC1.66□□□□□ -2.14
MSH3P20585 RNU6-702P-201ENST00000364982 107 ntBASIC1.66□□□□□ -2.14
MSH3P20585 Y_RNA.341-201ENST00000365341 102 ntBASIC1.66□□□□□ -2.14
MSH3P20585 Y_RNA.456-201ENST00000384232 111 ntBASIC1.66□□□□□ -2.14
MSH3P20585 Y_RNA.562-201ENST00000384695 113 ntBASIC1.66□□□□□ -2.14
MSH3P20585 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.66□□□□□ -2.14
MSH3P20585 RNA5SP100-201ENST00000410903 110 ntBASIC1.66□□□□□ -2.14
MSH3P20585 RNA5SP59-201ENST00000410922 110 ntBASIC1.66□□□□□ -2.14
MSH3P20585 AC009310.1-201ENST00000414414 451 ntBASIC1.66□□□□□ -2.14
MSH3P20585 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.66□□□□□ -2.14
MSH3P20585 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.66□□□□□ -2.14
MSH3P20585 SNORA27.4-201ENST00000516650 95 ntBASIC1.66□□□□□ -2.14
MSH3P20585 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.66□□□□□ -2.14
MSH3P20585 AC015720.1-201ENST00000565251 277 ntBASIC1.66□□□□□ -2.14
MSH3P20585 MIR4713-201ENST00000582691 75 ntBASIC1.66□□□□□ -2.14
MSH3P20585 AC104984.5-201ENST00000586878 94 ntBASIC1.66□□□□□ -2.14
MSH3P20585 AC012433.1-201ENST00000588916 398 ntBASIC1.66□□□□□ -2.14
MSH3P20585 AL512605.2-201ENST00000592972 256 ntBASIC1.66□□□□□ -2.14
MSH3P20585 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.66□□□□□ -2.14
MSH3P20585 AC004832.4-201ENST00000608952 331 ntBASIC1.66□□□□□ -2.14
MSH3P20585 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.66□□□□□ -2.14
MSH3P20585 MIR6715A-201ENST00000615929 79 ntBASIC1.66□□□□□ -2.14
MSH3P20585 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.66□□□□□ -2.14
MSH3P20585 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
MSH3P20585 RNU6-801P-201ENST00000364087 105 ntBASIC1.65□□□□□ -2.15
MSH3P20585 SNORA63D-201ENST00000364359 132 ntBASIC1.65□□□□□ -2.15
MSH3P20585 RNU6-514P-201ENST00000384208 107 ntBASIC1.65□□□□□ -2.15
MSH3P20585 RNU6-296P-201ENST00000384608 107 ntBASIC1.65□□□□□ -2.15
MSH3P20585 RNU6-136P-201ENST00000384663 107 ntBASIC1.65□□□□□ -2.15
MSH3P20585 RNU6-376P-201ENST00000384731 106 ntBASIC1.65□□□□□ -2.15
MSH3P20585 RNU2-38P-201ENST00000410856 79 ntBASIC1.65□□□□□ -2.15
MSH3P20585 AL162725.1-201ENST00000435405 301 ntBASIC1.65□□□□□ -2.15
MSH3P20585 RPS27P1-201ENST00000450552 247 ntBASIC1.65□□□□□ -2.15
MSH3P20585 RNU6-1132P-201ENST00000459214 107 ntBASIC1.65□□□□□ -2.15
MSH3P20585 AC004817.2-201ENST00000561794 651 ntBASIC1.65□□□□□ -2.15
MSH3P20585 DEFB122-202ENST00000569013 197 ntBASIC1.65□□□□□ -2.15
MSH3P20585 AC062037.2-201ENST00000610137 73 ntBASIC1.65□□□□□ -2.15
MSH3P20585 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.65□□□□□ -2.15
MSH3P20585 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
MSH3P20585 AC018630.2-201ENST00000534866 2403 ntBASIC1.64□□□□□ -2.15
MSH3P20585 UBE2WP1-201ENST00000362030 340 ntBASIC1.64□□□□□ -2.15
MSH3P20585 Y_RNA.14-201ENST00000362415 103 ntBASIC1.64□□□□□ -2.15
MSH3P20585 AC069257.2-201ENST00000441819 155 ntBASIC1.64□□□□□ -2.15
MSH3P20585 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.64□□□□□ -2.15
MSH3P20585 AC091178.2-201ENST00000584401 117 ntBASIC1.64□□□□□ -2.15
MSH3P20585 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.64□□□□□ -2.15
MSH3P20585 AC022217.4-201ENST00000604389 163 ntBASIC1.64□□□□□ -2.15
MSH3P20585 AC010900.2-201ENST00000604508 210 ntBASIC1.64□□□□□ -2.15
MSH3P20585 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.64□□□□□ -2.15
MSH3P20585 U2.14-201ENST00000615943 113 ntBASIC1.64□□□□□ -2.15
MSH3P20585 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
MSH3P20585 WWP1P1-201ENST00000466609 2769 ntBASIC1.63□□□□□ -2.15
MSH3P20585 Y_RNA.44-201ENST00000362676 108 ntBASIC1.63□□□□□ -2.15
MSH3P20585 Y_RNA.217-201ENST00000364214 105 ntBASIC1.63□□□□□ -2.15
MSH3P20585 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
MSH3P20585 RNU6-662P-201ENST00000384253 104 ntBASIC1.63□□□□□ -2.15
MSH3P20585 MIR520A-201ENST00000384862 85 ntBASIC1.63□□□□□ -2.15
MSH3P20585 RNA5SP109-201ENST00000391010 116 ntBASIC1.63□□□□□ -2.15
MSH3P20585 SNORA26.5-201ENST00000391215 123 ntBASIC1.63□□□□□ -2.15
MSH3P20585 RNU11-5P-201ENST00000391216 129 ntBASIC1.63□□□□□ -2.15
MSH3P20585 AL606517.2-201ENST00000442855 241 ntBASIC1.63□□□□□ -2.15
MSH3P20585 Y_RNA.641-201ENST00000459414 105 ntBASIC1.63□□□□□ -2.15
MSH3P20585 Y_RNA.637-201ENST00000459424 114 ntBASIC1.63□□□□□ -2.15
MSH3P20585 RNU7-94P-201ENST00000459576 63 ntBASIC1.63□□□□□ -2.15
MSH3P20585 AC091021.1-201ENST00000468051 388 ntBASIC1.63□□□□□ -2.15
MSH3P20585 MIR3683-201ENST00000580847 82 ntBASIC1.63□□□□□ -2.15
MSH3P20585 AC005972.2-201ENST00000604690 348 ntBASIC1.63□□□□□ -2.15
MSH3P20585 AC103810.8-201ENST00000607347 118 ntBASIC1.63□□□□□ -2.15
MSH3P20585 AL078604.3-201ENST00000615580 211 ntBASIC1.63□□□□□ -2.15
MSH3P20585 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.63□□□□□ -2.15
MSH3P20585 MIR6079-201ENST00000635807 62 ntBASIC1.63□□□□□ -2.15
MSH3P20585 Y_RNA.275-201ENST00000364726 110 ntBASIC1.62□□□□□ -2.15
MSH3P20585 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
MSH3P20585 Y_RNA.352-201ENST00000365439 102 ntBASIC1.62□□□□□ -2.15
MSH3P20585 RNU6-1323P-201ENST00000384025 107 ntBASIC1.62□□□□□ -2.15
MSH3P20585 SNORA72.4-201ENST00000384174 132 ntBASIC1.62□□□□□ -2.15
MSH3P20585 MIR764-201ENST00000390811 85 ntBASIC1.62□□□□□ -2.15
MSH3P20585 RNU6-763P-201ENST00000390865 106 ntBASIC1.62□□□□□ -2.15
MSH3P20585 RNU2-14P-201ENST00000411053 191 ntBASIC1.62□□□□□ -2.15
MSH3P20585 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.62□□□□□ -2.15
MSH3P20585 AC104332.1-201ENST00000440471 797 ntBASIC1.62□□□□□ -2.15
MSH3P20585 snoU13.23-201ENST00000458863 104 ntBASIC1.62□□□□□ -2.15
MSH3P20585 RPL39P38-201ENST00000467018 153 ntBASIC1.62□□□□□ -2.15
MSH3P20585 AC108210.2-201ENST00000503681 201 ntBASIC1.62□□□□□ -2.15
MSH3P20585 RNU6-341P-201ENST00000516973 96 ntBASIC1.62□□□□□ -2.15
MSH3P20585 RNA5SP437-201ENST00000517249 129 ntBASIC1.62□□□□□ -2.15
MSH3P20585 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.62□□□□□ -2.15
MSH3P20585 MIR4255-201ENST00000579351 72 ntBASIC1.62□□□□□ -2.15
MSH3P20585 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
MSH3P20585 RNU6-1272P-201ENST00000362776 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 205.4 ms