Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HLA-DOBP13765 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.73□□□□□ -2.13
HLA-DOBP13765 RNU7-141P-201ENST00000459304 62 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 Y_RNA.638-201ENST00000459374 113 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 AC055731.1-201ENST00000474387 401 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 AL163195.1-201ENST00000496941 348 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 RNU1-41P-201ENST00000516161 162 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 RNU1-48P-201ENST00000516400 162 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 RNU7-115P-201ENST00000516433 55 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 AC009779.6-201ENST00000603972 165 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 MIR548AY-201ENST00000617669 107 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 MIR6079-201ENST00000635807 62 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DOBP13765 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
HLA-DOBP13765 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
HLA-DOBP13765 RNU6-1048P-201ENST00000364054 107 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 SNORA6-201ENST00000384033 151 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 MTCO2P33-201ENST00000402100 465 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 RNU6-651P-201ENST00000411040 105 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 RN7SKP192-201ENST00000411291 327 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 RPS4XP11-201ENST00000446897 772 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 U8.19-201ENST00000459095 133 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 COX6CP14-201ENST00000469580 174 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DOBP13765 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.72□□□□□ -2.13
HLA-DOBP13765 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.72□□□□□ -2.13
HLA-DOBP13765 RNVU1-2-201ENST00000516326 135 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 RNU6-794P-201ENST00000517261 64 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 AC024405.2-202ENST00000532731 184 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 AC084364.2-201ENST00000546924 395 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 AC127455.1-201ENST00000565496 145 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 MIR5692C2-201ENST00000577959 77 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 MIR4513-201ENST00000581077 86 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 AC091178.2-201ENST00000584401 117 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 POLR3GP1-201ENST00000594073 261 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 AC078938.1-201ENST00000620993 318 ntBASIC1.72□□□□□ -2.13
HLA-DOBP13765 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.72□□□□□ -2.13
HLA-DOBP13765 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DOBP13765 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
HLA-DOBP13765 Y_RNA.292-201ENST00000364904 97 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 U8.7-201ENST00000364940 136 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 RNU6-1318P-201ENST00000365389 103 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 RNU6-144P-201ENST00000383951 107 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 SNORA70B-201ENST00000384210 135 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 SNORA72-201ENST00000384339 132 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 RNU6-136P-201ENST00000384663 107 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HLA-DOBP13765 AC245047.4-201ENST00000433189 144 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.71□□□□□ -2.14
HLA-DOBP13765 AC091021.1-201ENST00000468051 388 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 AC117454.1-201ENST00000491120 168 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 RNU6-341P-201ENST00000516973 96 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 RNU6-1096P-201ENST00000517089 102 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 SUB1P4-201ENST00000566062 339 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.71□□□□□ -2.14
HLA-DOBP13765 MIR203B-201ENST00000636080 86 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.71□□□□□ -2.14
HLA-DOBP13765 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DOBP13765 AC134026.1-201ENST00000623249 2239 ntBASIC1.7□□□□□ -2.14
HLA-DOBP13765 RNU6-1205P-201ENST00000363625 106 ntBASIC1.7□□□□□ -2.14
HLA-DOBP13765 Y_RNA.304-201ENST00000365011 112 ntBASIC1.7□□□□□ -2.14
HLA-DOBP13765 RNY4P28-201ENST00000365281 93 ntBASIC1.7□□□□□ -2.14
HLA-DOBP13765 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HLA-DOBP13765 HMGN2P38-201ENST00000423806 265 ntBASIC1.7□□□□□ -2.14
HLA-DOBP13765 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DOBP13765 SNORD116-28-201ENST00000516123 91 ntBASIC1.7□□□□□ -2.14
HLA-DOBP13765 AC100821.1-201ENST00000523153 2479 ntBASIC1.7□□□□□ -2.14
HLA-DOBP13765 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DOBP13765 AL358944.1-201ENST00000528537 144 ntBASIC1.7□□□□□ -2.14
HLA-DOBP13765 AC008555.8-201ENST00000623602 2168 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
HLA-DOBP13765 Y_RNA.200-201ENST00000364018 102 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 SNORA63D-201ENST00000364359 132 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 SNORA16B-201ENST00000364674 135 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 MIR520A-201ENST00000384862 85 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 MIR1298-201ENST00000408783 112 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 SNORA36B-201ENST00000410438 131 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 AC108059.2-201ENST00000434626 151 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 RPS27P21-201ENST00000486977 252 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 RPL23AP54-201ENST00000495129 419 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 AC011604.1-201ENST00000545978 196 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 MIR5688-201ENST00000580619 83 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 AC011921.3-201ENST00000605540 361 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DOBP13765 AC090425.1-201ENST00000610007 140 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 AL359851.1-201ENST00000569460 4997 ntBASIC1.69□□□□□ -2.14
HLA-DOBP13765 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DOBP13765 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DOBP13765 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DOBP13765 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HLA-DOBP13765 RNU6-112P-201ENST00000363599 104 ntBASIC1.68□□□□□ -2.14
HLA-DOBP13765 Y_RNA.262-201ENST00000364641 102 ntBASIC1.68□□□□□ -2.14
HLA-DOBP13765 Y_RNA.293-201ENST00000364908 93 ntBASIC1.68□□□□□ -2.14
HLA-DOBP13765 RNU2-40P-201ENST00000410833 196 ntBASIC1.68□□□□□ -2.14
HLA-DOBP13765 AC245047.3-201ENST00000429428 127 ntBASIC1.68□□□□□ -2.14
HLA-DOBP13765 RNU6-437P-201ENST00000459408 95 ntBASIC1.68□□□□□ -2.14
HLA-DOBP13765 AP002004.2-201ENST00000531656 154 ntBASIC1.68□□□□□ -2.14
HLA-DOBP13765 MIR3935-201ENST00000583472 104 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms