Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.96□□□□□ -2.1
MMP3P08254 U6.73-201ENST00000619194 103 ntBASIC1.96□□□□□ -2.1
MMP3P08254 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.96□□□□□ -2.1
MMP3P08254 U6.108-201ENST00000637764 58 ntBASIC1.96□□□□□ -2.1
MMP3P08254 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
MMP3P08254 Y_RNA.341-201ENST00000365341 102 ntBASIC1.95□□□□□ -2.1
MMP3P08254 SNORA8-201ENST00000384574 139 ntBASIC1.95□□□□□ -2.1
MMP3P08254 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
MMP3P08254 RNA5SP323-201ENST00000391094 133 ntBASIC1.95□□□□□ -2.1
MMP3P08254 SNORA26.5-201ENST00000391215 123 ntBASIC1.95□□□□□ -2.1
MMP3P08254 RNU4-62P-201ENST00000410125 130 ntBASIC1.95□□□□□ -2.1
MMP3P08254 RNA5SP511-201ENST00000410487 115 ntBASIC1.95□□□□□ -2.1
MMP3P08254 RNA5SP501-201ENST00000410990 112 ntBASIC1.95□□□□□ -2.1
MMP3P08254 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
MMP3P08254 AC004832.4-201ENST00000608952 331 ntBASIC1.95□□□□□ -2.1
MMP3P08254 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
MMP3P08254 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
MMP3P08254 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
MMP3P08254 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
MMP3P08254 RNU6-801P-201ENST00000364087 105 ntBASIC1.94□□□□□ -2.1
MMP3P08254 Y_RNA.275-201ENST00000364726 110 ntBASIC1.94□□□□□ -2.1
MMP3P08254 RNU6-117P-201ENST00000365415 107 ntBASIC1.94□□□□□ -2.1
MMP3P08254 RNU6-1289P-201ENST00000384431 106 ntBASIC1.94□□□□□ -2.1
MMP3P08254 RNU6-376P-201ENST00000384731 106 ntBASIC1.94□□□□□ -2.1
MMP3P08254 RNU6-763P-201ENST00000390865 106 ntBASIC1.94□□□□□ -2.1
MMP3P08254 RNA5SP465-201ENST00000391195 109 ntBASIC1.94□□□□□ -2.1
MMP3P08254 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.94□□□□□ -2.1
MMP3P08254 AC024067.1-201ENST00000426199 223 ntBASIC1.94□□□□□ -2.1
MMP3P08254 BTF3P11-201ENST00000426582 477 ntBASIC1.94□□□□□ -2.1
MMP3P08254 RPS20P10-201ENST00000451209 253 ntBASIC1.94□□□□□ -2.1
MMP3P08254 SUMO1P2-201ENST00000452524 304 ntBASIC1.94□□□□□ -2.1
MMP3P08254 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.94□□□□□ -2.1
MMP3P08254 AC005786.1-201ENST00000588553 154 ntBASIC1.94□□□□□ -2.1
MMP3P08254 AC007229.1-201ENST00000590455 412 ntBASIC1.94□□□□□ -2.1
MMP3P08254 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.94□□□□□ -2.1
MMP3P08254 MIR502-201ENST00000606349 86 ntBASIC1.94□□□□□ -2.1
MMP3P08254 AC006435.5-201ENST00000624486 112 ntBASIC1.94□□□□□ -2.1
MMP3P08254 AC068647.2-201ENST00000637380 353 ntBASIC1.94□□□□□ -2.1
MMP3P08254 Y_RNA.65-201ENST00000362846 100 ntBASIC1.93□□□□□ -2.1
MMP3P08254 Y_RNA.310-201ENST00000365063 113 ntBASIC1.93□□□□□ -2.1
MMP3P08254 Y_RNA.352-201ENST00000365439 102 ntBASIC1.93□□□□□ -2.1
MMP3P08254 Y_RNA.416-201ENST00000384014 113 ntBASIC1.93□□□□□ -2.1
MMP3P08254 Y_RNA.539-201ENST00000384635 107 ntBASIC1.93□□□□□ -2.1
MMP3P08254 MIR548H3-201ENST00000408771 118 ntBASIC1.93□□□□□ -2.1
MMP3P08254 Y_RNA.618-201ENST00000410949 107 ntBASIC1.93□□□□□ -2.1
MMP3P08254 AP1B1P2-201ENST00000416196 106 ntBASIC1.93□□□□□ -2.1
MMP3P08254 CST2P1-201ENST00000425770 87 ntBASIC1.93□□□□□ -2.1
MMP3P08254 U8.19-201ENST00000459095 133 ntBASIC1.93□□□□□ -2.1
MMP3P08254 SNORA27.4-201ENST00000516650 95 ntBASIC1.93□□□□□ -2.1
MMP3P08254 MIR4303-201ENST00000581299 66 ntBASIC1.93□□□□□ -2.1
MMP3P08254 AL359821.1-201ENST00000605519 182 ntBASIC1.93□□□□□ -2.1
MMP3P08254 AL359075.3-201ENST00000613288 217 ntBASIC1.93□□□□□ -2.1
MMP3P08254 AC068700.1-201ENST00000565862 3754 ntBASIC1.93□□□□□ -2.1
MMP3P08254 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
MMP3P08254 RNU6-1272P-201ENST00000362776 107 ntBASIC1.92□□□□□ -2.1
MMP3P08254 RNY1P10-201ENST00000363268 113 ntBASIC1.92□□□□□ -2.1
MMP3P08254 RNU6-379P-201ENST00000363813 104 ntBASIC1.92□□□□□ -2.1
MMP3P08254 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
MMP3P08254 MTCO2P33-201ENST00000402100 465 ntBASIC1.92□□□□□ -2.1
MMP3P08254 RNU6-710P-201ENST00000410424 105 ntBASIC1.92□□□□□ -2.1
MMP3P08254 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
MMP3P08254 HSPE1P21-201ENST00000438283 308 ntBASIC1.92□□□□□ -2.1
MMP3P08254 AL606517.2-201ENST00000442855 241 ntBASIC1.92□□□□□ -2.1
MMP3P08254 Y_RNA.637-201ENST00000459424 114 ntBASIC1.92□□□□□ -2.1
MMP3P08254 AC055731.1-201ENST00000474387 401 ntBASIC1.92□□□□□ -2.1
MMP3P08254 AL163195.1-201ENST00000496941 348 ntBASIC1.92□□□□□ -2.1
MMP3P08254 AC005840.1-201ENST00000498412 377 ntBASIC1.92□□□□□ -2.1
MMP3P08254 RNU6-388P-201ENST00000517012 105 ntBASIC1.92□□□□□ -2.1
MMP3P08254 RNU6-389P-201ENST00000517048 105 ntBASIC1.92□□□□□ -2.1
MMP3P08254 RNU6-111P-201ENST00000517179 105 ntBASIC1.92□□□□□ -2.1
MMP3P08254 AC015720.1-201ENST00000565251 277 ntBASIC1.92□□□□□ -2.1
MMP3P08254 MIR4529-201ENST00000578110 78 ntBASIC1.92□□□□□ -2.1
MMP3P08254 AL008718.3-201ENST00000610217 321 ntBASIC1.92□□□□□ -2.1
MMP3P08254 AC008555.8-201ENST00000623602 2168 ntBASIC1.92□□□□□ -2.1
MMP3P08254 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
MMP3P08254 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
MMP3P08254 Y_RNA.76-201ENST00000362931 109 ntBASIC1.91□□□□□ -2.1
MMP3P08254 Y_RNA.217-201ENST00000364214 105 ntBASIC1.91□□□□□ -2.1
MMP3P08254 SNORA20.1-201ENST00000364790 130 ntBASIC1.91□□□□□ -2.1
MMP3P08254 Y_RNA.368-201ENST00000365547 113 ntBASIC1.91□□□□□ -2.1
MMP3P08254 RNU6-338P-201ENST00000383888 105 ntBASIC1.91□□□□□ -2.1
MMP3P08254 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
MMP3P08254 SNORA40.19-201ENST00000390846 128 ntBASIC1.91□□□□□ -2.1
MMP3P08254 RNA5SP109-201ENST00000391010 116 ntBASIC1.91□□□□□ -2.1
MMP3P08254 SNORA67.5-201ENST00000391036 107 ntBASIC1.91□□□□□ -2.1
MMP3P08254 Y_RNA.641-201ENST00000459414 105 ntBASIC1.91□□□□□ -2.1
MMP3P08254 AC091021.1-201ENST00000468051 388 ntBASIC1.91□□□□□ -2.1
MMP3P08254 AC117454.1-201ENST00000491120 168 ntBASIC1.91□□□□□ -2.1
MMP3P08254 TRMT112P2-201ENST00000512910 132 ntBASIC1.91□□□□□ -2.1
MMP3P08254 SNORD116-28-201ENST00000516123 91 ntBASIC1.91□□□□□ -2.1
MMP3P08254 RNU6-1278P-201ENST00000516130 107 ntBASIC1.91□□□□□ -2.1
MMP3P08254 RNU1-142P-201ENST00000516682 145 ntBASIC1.91□□□□□ -2.1
MMP3P08254 RNU2-19P-201ENST00000517288 84 ntBASIC1.91□□□□□ -2.1
MMP3P08254 MIR4419B-201ENST00000577260 68 ntBASIC1.91□□□□□ -2.1
MMP3P08254 AC069114.2-201ENST00000604699 304 ntBASIC1.91□□□□□ -2.1
MMP3P08254 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.91□□□□□ -2.1
MMP3P08254 AC090425.1-201ENST00000610007 140 ntBASIC1.91□□□□□ -2.1
MMP3P08254 AC078938.1-201ENST00000620993 318 ntBASIC1.91□□□□□ -2.1
MMP3P08254 snoU18.1-201ENST00000629629 71 ntBASIC1.91□□□□□ -2.1
MMP3P08254 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms