Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.48□□□□□ -2.65
POLR1AO95602 AL031779.1-201ENST00000415663 330 ntBASIC-1.48□□□□□ -2.65
POLR1AO95602 AL157687.1-201ENST00000554853 619 ntBASIC-1.48□□□□□ -2.65
POLR1AO95602 RNU6-511P-201ENST00000363496 107 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 RNU6-431P-201ENST00000383874 107 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 SNORA22B-201ENST00000383876 138 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-1.49□□□□□ -2.65
POLR1AO95602 AC073869.9-201ENST00000641610 120 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 RNU6-777P-201ENST00000364265 104 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-1.49□□□□□ -2.65
POLR1AO95602 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.49□□□□□ -2.65
POLR1AO95602 AP000542.1-201ENST00000448473 371 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 EPS15P1-201ENST00000448836 336 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 AC116353.2-201ENST00000505332 712 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 MIR3179-1-201ENST00000578940 84 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 MIR3179-2-201ENST00000579107 84 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 MIR3179-3-201ENST00000579566 84 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 SNORA70.25-201ENST00000612741 95 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 MIR3179-4-201ENST00000617599 84 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 MTND1P7-201ENST00000632801 297 ntBASIC-1.49□□□□□ -2.65
POLR1AO95602 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 MIR518F-201ENST00000384973 87 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 MIR518B-201ENST00000385127 83 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.5□□□□□ -2.65
POLR1AO95602 MTND4LP14-201ENST00000429447 288 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 AC114878.1-201ENST00000441166 358 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 MTCO1P27-201ENST00000448269 226 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.5□□□□□ -2.65
POLR1AO95602 RNU6-475P-201ENST00000516073 104 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 AC026421.1-201ENST00000519101 163 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.5□□□□□ -2.65
POLR1AO95602 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 AP002782.1-201ENST00000623107 614 ntBASIC-1.5□□□□□ -2.65
POLR1AO95602 RNU6-376P-201ENST00000384731 106 ntBASIC-1.51□□□□□ -2.65
POLR1AO95602 MIR517B-201ENST00000385102 67 ntBASIC-1.51□□□□□ -2.65
POLR1AO95602 SNORA75.4-201ENST00000391278 119 ntBASIC-1.51□□□□□ -2.65
POLR1AO95602 MIR8485-201ENST00000401372 91 ntBASIC-1.51□□□□□ -2.65
POLR1AO95602 AC069431.2-201ENST00000604149 1099 ntBASIC-1.51□□□□□ -2.65
POLR1AO95602 AP001836.1-201ENST00000604675 523 ntBASIC-1.51□□□□□ -2.65
POLR1AO95602 Y_RNA.311-201ENST00000365068 96 ntBASIC-1.52□□□□□ -2.65
POLR1AO95602 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.52□□□□□ -2.65
POLR1AO95602 SNORD28B-201ENST00000390993 75 ntBASIC-1.52□□□□□ -2.65
POLR1AO95602 MTND4P33-201ENST00000556706 766 ntBASIC-1.52□□□□□ -2.65
POLR1AO95602 MIR6129-201ENST00000616087 109 ntBASIC-1.52□□□□□ -2.65
POLR1AO95602 RNU4-28P-201ENST00000364739 141 ntBASIC-1.52□□□□□ -2.65
POLR1AO95602 SNORD115-44-201ENST00000365391 82 ntBASIC-1.52□□□□□ -2.65
POLR1AO95602 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.52□□□□□ -2.65
POLR1AO95602 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.52□□□□□ -2.65
POLR1AO95602 SNORA43.4-201ENST00000629559 138 ntBASIC-1.52□□□□□ -2.65
POLR1AO95602 RNU6-490P-201ENST00000362985 107 ntBASIC-1.53□□□□□ -2.65
POLR1AO95602 Y_RNA.408-201ENST00000383987 102 ntBASIC-1.53□□□□□ -2.65
POLR1AO95602 RNU6-190P-201ENST00000384154 102 ntBASIC-1.53□□□□□ -2.65
POLR1AO95602 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
POLR1AO95602 RNU6-370P-201ENST00000411008 104 ntBASIC-1.53□□□□□ -2.65
POLR1AO95602 AL031274.1-201ENST00000450334 232 ntBASIC-1.53□□□□□ -2.65
POLR1AO95602 RPL7P42-201ENST00000481005 679 ntBASIC-1.53□□□□□ -2.65
POLR1AO95602 HSPE1P23-201ENST00000509838 286 ntBASIC-1.53□□□□□ -2.65
POLR1AO95602 AC012409.4-201ENST00000612923 249 ntBASIC-1.53□□□□□ -2.65
POLR1AO95602 AL139418.1-201ENST00000613613 177 ntBASIC-1.53□□□□□ -2.65
POLR1AO95602 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 RNU6-226P-201ENST00000363778 107 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 AL445193.1-201ENST00000441183 141 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 AL138752.1-201ENST00000452964 351 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 AC091959.1-201ENST00000495857 238 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 AC010598.1-201ENST00000510378 103 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 MRPS10P1-201ENST00000448483 130 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.54□□□□□ -2.66
POLR1AO95602 MIR6851-201ENST00000617060 67 ntBASIC-1.54□□□□□ -2.66
POLR1AO95602 RNU6-455P-201ENST00000384681 107 ntBASIC-1.55□□□□□ -2.66
POLR1AO95602 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.55□□□□□ -2.66
POLR1AO95602 AL158050.1-201ENST00000416077 457 ntBASIC-1.55□□□□□ -2.66
POLR1AO95602 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.55□□□□□ -2.66
POLR1AO95602 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.55□□□□□ -2.66
POLR1AO95602 RNA5SP20-201ENST00000515976 84 ntBASIC-1.55□□□□□ -2.66
POLR1AO95602 RNA5SP54-201ENST00000516951 92 ntBASIC-1.55□□□□□ -2.66
POLR1AO95602 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-1.55□□□□□ -2.66
POLR1AO95602 uc_338.10-201ENST00000621872 182 ntBASIC-1.55□□□□□ -2.66
POLR1AO95602 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 RNU6-535P-201ENST00000384722 107 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 MIR487A-201ENST00000385009 80 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 SSR1P2-201ENST00000415208 787 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.56□□□□□ -2.66
POLR1AO95602 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 snoU13.2-201ENST00000459201 104 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 RNY4P37-201ENST00000516225 96 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.56□□□□□ -2.66
POLR1AO95602 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-1.56□□□□□ -2.66
POLR1AO95602 AC134698.4-201ENST00000523451 826 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.56□□□□□ -2.66
POLR1AO95602 MIR5708-201ENST00000579723 85 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 POLR3GP1-201ENST00000594073 261 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 MIR6740-201ENST00000618268 113 ntBASIC-1.56□□□□□ -2.66
POLR1AO95602 AC137590.2-201ENST00000619709 240 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms