Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MIR802-201ENST00000390235 94 ntBASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 RNA5SP492-201ENST00000411330 114 ntBASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 RN7SL20P-201ENST00000488827 297 ntBASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 AL163195.1-201ENST00000496941 348 ntBASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 RNA5SP458-201ENST00000516188 119 ntBASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 RNU7-149P-201ENST00000516739 59 ntBASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 Pinc.1-201ENST00000616452 154 ntBASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 U6.108-201ENST00000637764 58 ntBASIC3.31□□□□□ -1.88
TMEM88BA6NKF7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 MIR423-201ENST00000362201 94 ntBASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 Y_RNA.253-201ENST00000364562 112 ntBASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 RNU6-81P-201ENST00000365608 104 ntBASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 RNU6-597P-201ENST00000365620 102 ntBASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 RNU6-484P-201ENST00000384016 107 ntBASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 RNU6-131P-201ENST00000391144 107 ntBASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 AC090142.3-201ENST00000519012 385 ntBASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 MIR548AI-201ENST00000579940 88 ntBASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.3□□□□□ -1.88
TMEM88BA6NKF7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 SNORD113-1-201ENST00000365321 69 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 RNU6-768P-201ENST00000384683 107 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 MIR569-201ENST00000385228 96 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 SNORA40-201ENST00000388090 126 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 RNA5SP465-201ENST00000391195 109 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 RNU4-53P-201ENST00000410828 140 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 RN7SL297P-201ENST00000483161 293 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 SNORA25.12-201ENST00000516202 82 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 RNU6-426P-201ENST00000516464 97 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 RNU7-28P-201ENST00000516759 62 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 RNU6-365P-201ENST00000517113 106 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 MIR3658-201ENST00000636291 56 ntBASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM88BA6NKF7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 AC008264.2-201ENST00000610193 3731 ntBASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 MIR126-201ENST00000362291 85 ntBASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 Y_RNA.4-201ENST00000362333 112 ntBASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 Y_RNA.164-201ENST00000363709 102 ntBASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 RNU6-1081P-201ENST00000384537 107 ntBASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 RHEBP3-201ENST00000411920 351 ntBASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 AC010332.2-201ENST00000613083 1904 ntBASIC3.28□□□□□ -1.88
TMEM88BA6NKF7 RNU6-1019P-201ENST00000364424 107 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 RNU6-1117P-201ENST00000384525 104 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 MIR512-1-201ENST00000384913 84 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 RNU11-3P-201ENST00000391111 133 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 AC245047.3-201ENST00000429428 127 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 HMGN2P3-201ENST00000433603 273 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 HMGN2P5-201ENST00000436882 273 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 AL353997.5-201ENST00000618886 171 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM88BA6NKF7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 RNA5SP289-201ENST00000362332 137 ntBASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 SNORA33-201ENST00000363664 130 ntBASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 Y_RNA.634-201ENST00000364811 113 ntBASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 RNU6-950P-201ENST00000384651 107 ntBASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 MLLT10P1-201ENST00000418346 262 ntBASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 AC097639.2-201ENST00000603159 172 ntBASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 SNORA28-201ENST00000606769 126 ntBASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
TMEM88BA6NKF7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 SNORA1B-201ENST00000362535 133 ntBASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 RNA5SP482-201ENST00000391269 118 ntBASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 RN7SKP223-201ENST00000410582 62 ntBASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 RNA5SP270-201ENST00000411361 118 ntBASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 BX510359.4-201ENST00000423750 193 ntBASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 AC099677.2-201ENST00000436385 175 ntBASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 RNU6-62P-201ENST00000516526 102 ntBASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 RNU6-504P-201ENST00000516568 104 ntBASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 AC022202.1-201ENST00000613515 211 ntBASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM88BA6NKF7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM88BA6NKF7 Y_RNA.265-201ENST00000364677 108 ntBASIC3.24□□□□□ -1.89
TMEM88BA6NKF7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TMEM88BA6NKF7 MIR548I2-201ENST00000408348 149 ntBASIC3.24□□□□□ -1.89
TMEM88BA6NKF7 MIR4658-201ENST00000584344 65 ntBASIC3.24□□□□□ -1.89
TMEM88BA6NKF7 TUG1_4.1-201ENST00000619464 181 ntBASIC3.24□□□□□ -1.89
TMEM88BA6NKF7 AC073476.4-201ENST00000628409 72 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms