Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU2-38P-201ENST00000410856 79 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX2Q9NPC8 MTND2P29-201ENST00000438595 412 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 HSPE1P13-201ENST00000451143 297 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 AC010409.1-201ENST00000487382 476 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.68□□□□□ -2.14
SIX2Q9NPC8 RNU6-191P-201ENST00000516295 94 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 RNVU1-2-201ENST00000516326 135 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 RNU7-128P-201ENST00000517247 62 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.68□□□□□ -2.14
SIX2Q9NPC8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.68□□□□□ -2.14
SIX2Q9NPC8 AC007229.1-201ENST00000590455 412 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 MIR502-201ENST00000606349 86 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 U6.108-201ENST00000637764 58 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.67□□□□□ -2.14
SIX2Q9NPC8 RNU6-117P-201ENST00000365415 107 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 AL355497.1-201ENST00000406262 551 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 RNU6-1186P-201ENST00000410429 97 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 RNA5SP501-201ENST00000410990 112 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 AC024067.1-201ENST00000426199 223 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 AL135790.2-201ENST00000437701 267 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 RPS27P21-201ENST00000486977 252 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 AC091959.1-201ENST00000495857 238 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 RNU6-1337P-201ENST00000516525 95 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 RPL21P9-201ENST00000556149 474 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 AC012433.1-201ENST00000588916 398 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 AC062037.2-201ENST00000610137 73 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 AL359075.3-201ENST00000613288 217 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.67□□□□□ -2.14
SIX2Q9NPC8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SIX2Q9NPC8 AC245060.5-201ENST00000610778 3293 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 Y_RNA.14-201ENST00000362415 103 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 Y_RNA.172-201ENST00000363765 102 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 SNORA16B-201ENST00000364674 135 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 RNU6-514P-201ENST00000384208 107 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 Y_RNA.562-201ENST00000384695 113 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 RNU6-1248P-201ENST00000391096 64 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 RNU6-855P-201ENST00000410395 104 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 EBAG9P1-201ENST00000418955 543 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 AC010154.1-201ENST00000425857 269 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 RNU6-1132P-201ENST00000459214 107 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.66□□□□□ -2.14
SIX2Q9NPC8 RNU7-99P-201ENST00000516271 62 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 RNU7-172P-201ENST00000517125 64 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 AC024995.1-201ENST00000523014 93 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 MIR5094-201ENST00000578766 85 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 AC069114.2-201ENST00000604699 304 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 U2.14-201ENST00000615943 113 ntBASIC1.66□□□□□ -2.14
SIX2Q9NPC8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
SIX2Q9NPC8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SIX2Q9NPC8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
SIX2Q9NPC8 UBE2WP1-201ENST00000362030 340 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.368-201ENST00000365547 113 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.65□□□□□ -2.15
SIX2Q9NPC8 SNORD116-13-201ENST00000384408 92 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX2Q9NPC8 AC245047.4-201ENST00000433189 144 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 RPS26P45-201ENST00000471748 340 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 RNU6-1278P-201ENST00000516130 107 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 RNU1-142P-201ENST00000516682 145 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 RNU6-63P-201ENST00000516690 95 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX2Q9NPC8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX2Q9NPC8 MIR4298-201ENST00000584380 73 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 AL512605.2-201ENST00000592972 256 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 AC078899.2-201ENST00000595282 212 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 AC004832.4-201ENST00000608952 331 ntBASIC1.65□□□□□ -2.15
SIX2Q9NPC8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SIX2Q9NPC8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.310-201ENST00000365063 113 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.341-201ENST00000365341 102 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.350-201ENST00000365409 98 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.456-201ENST00000384232 111 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 SNORA8-201ENST00000384574 139 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 RNA5SP323-201ENST00000391094 133 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 MIR1261-201ENST00000408659 82 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 RPS20P10-201ENST00000451209 253 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 snoU13.26-201ENST00000459452 105 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 RPL39P38-201ENST00000467018 153 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 AL163195.1-201ENST00000496941 348 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.64□□□□□ -2.15
SIX2Q9NPC8 SNORA27.4-201ENST00000516650 95 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.64□□□□□ -2.15
SIX2Q9NPC8 AC073413.2-201ENST00000604332 360 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 AP000942.4-201ENST00000604811 241 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 U1.36-201ENST00000620684 176 ntBASIC1.64□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.44-201ENST00000362676 108 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 RNU4-13P-201ENST00000364019 141 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 RNU6-1019P-201ENST00000364424 107 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 Y_RNA.352-201ENST00000365439 102 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 RNU6-376P-201ENST00000384731 106 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 AL356379.1-201ENST00000414105 126 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 SNORD13-201ENST00000459299 104 ntBASIC1.63□□□□□ -2.15
SIX2Q9NPC8 RPL23AP42-201ENST00000471152 471 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms