Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RNU6-341P-201ENST00000516973 96 ntBASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 Y_RNA.718-201ENST00000517110 102 ntBASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 RNU2-12P-201ENST00000517216 168 ntBASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 AL512310.8-201ENST00000550183 120 ntBASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 FAM106DP-201ENST00000586416 501 ntBASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 AL162424.1-201ENST00000602325 221 ntBASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 AL021879.1-201ENST00000611756 288 ntBASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 AC073349.3-201ENST00000617616 186 ntBASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.97□□□□□ -2.25
CDC42EP4Q9H3Q1 SNORD115-30-201ENST00000364117 82 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 SNORA25.8-201ENST00000364831 128 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-1310P-201ENST00000384153 107 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 MIR660-201ENST00000385235 97 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 MIR613-201ENST00000385248 95 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 STAG3L5P-204ENST00000443759 179 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 RPL39P38-201ENST00000467018 153 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 OR9P1P-201ENST00000496431 281 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 AC144568.1-201ENST00000520139 137 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 RAB11AP2-201ENST00000545905 639 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 RPL21P9-201ENST00000556149 474 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 CYP3A52P-201ENST00000563326 91 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 MIR3664-201ENST00000579074 99 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 MIR1302-1-201ENST00000637932 143 ntBASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CDC42EP4Q9H3Q1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 SNORA1B-201ENST00000362535 133 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-490P-201ENST00000362985 107 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 Y_RNA.259-201ENST00000364619 101 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-1040P-201ENST00000383974 107 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-505P-201ENST00000384427 107 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU11-5P-201ENST00000391216 129 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 CHEK2P4-201ENST00000450340 246 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU7-152P-201ENST00000458982 64 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU7-169P-201ENST00000459456 61 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RPS29P1-201ENST00000465274 159 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 OR2A41P-201ENST00000473586 105 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 AC092991.1-201ENST00000477176 376 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-875P-201ENST00000516488 106 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-911P-201ENST00000516523 104 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-1012P-201ENST00000516606 109 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 AC023442.1-201ENST00000531247 422 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 SNORA28-201ENST00000606769 126 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 AC133104.2-201ENST00000615272 193 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 AC004467.1-201ENST00000615678 330 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 AC127459.3-201ENST00000624328 466 ntBASIC0.95□□□□□ -2.26
CDC42EP4Q9H3Q1 Y_RNA.70-201ENST00000362886 110 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 Y_RNA.101-201ENST00000363154 102 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 Y_RNA.112-201ENST00000363250 102 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-1080P-201ENST00000383982 107 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-926P-201ENST00000384075 107 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 SNORA70.7-201ENST00000384159 133 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-424P-201ENST00000384367 105 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-376P-201ENST00000384731 106 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 CALM2P4-201ENST00000430810 426 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 AC099799.1-201ENST00000439809 192 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 FCF1P4-201ENST00000448326 183 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-1278P-201ENST00000516130 107 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 RNA5SP168-201ENST00000516642 112 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-699P-201ENST00000517081 110 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 AL355375.2-201ENST00000574825 175 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 AC240442.1-201ENST00000616055 283 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 U2.1-201ENST00000618978 145 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 MIR6515-201ENST00000619843 57 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 SNORD3E-202ENST00000627253 216 ntBASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CDC42EP4Q9H3Q1 Y_RNA.267-201ENST00000364679 109 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 Y_RNA.314-201ENST00000365114 102 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 Y_RNA.384-201ENST00000383909 102 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-708P-201ENST00000384217 107 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 Y_RNA.463-201ENST00000384271 102 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 MIR562-201ENST00000384894 95 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 SNORD78.2-201ENST00000391076 69 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 U8.16-201ENST00000391279 133 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-1199P-201ENST00000411249 104 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 Y_RNA.632-201ENST00000459189 102 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-1291P-201ENST00000516591 104 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-63P-201ENST00000516690 95 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU7-28P-201ENST00000516759 62 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 RNU6-165P-201ENST00000517170 99 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 AP002004.2-201ENST00000531656 154 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 MIR4801-201ENST00000582704 82 ntBASIC0.93□□□□□ -2.26
CDC42EP4Q9H3Q1 RBM11P1-201ENST00000604951 799 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms