Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC093831.2-201ENST00000624393 3427 ntBASIC2.79□□□□□ -1.96
PTCHD1Q96NR3 RNU6-915P-201ENST00000364943 103 ntBASIC2.79□□□□□ -1.96
PTCHD1Q96NR3 U8.9-201ENST00000365667 134 ntBASIC2.79□□□□□ -1.96
PTCHD1Q96NR3 MIR562-201ENST00000384894 95 ntBASIC2.79□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.584-201ENST00000391090 114 ntBASIC2.79□□□□□ -1.96
PTCHD1Q96NR3 AC092427.1-202ENST00000430569 476 ntBASIC2.79□□□□□ -1.96
PTCHD1Q96NR3 AL353689.1-201ENST00000438895 199 ntBASIC2.79□□□□□ -1.96
PTCHD1Q96NR3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.79□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.81-201ENST00000362997 102 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.91-201ENST00000363042 107 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.273-201ENST00000364703 102 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 Y_RNA.634-201ENST00000364811 113 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 RNU11-5P-201ENST00000391216 129 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 RN7SL633P-201ENST00000488974 297 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 RNU7-149P-201ENST00000516739 59 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 RNU7-128P-201ENST00000517247 62 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 AC107016.2-201ENST00000547968 190 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 AL359075.3-201ENST00000613288 217 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 Pinc.1-201ENST00000616452 154 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 MIR338-201ENST00000636369 67 ntBASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTCHD1Q96NR3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 SNORA44-201ENST00000384584 132 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 RNA5SP467-201ENST00000391274 118 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 SNORA26-201ENST00000391286 122 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 SNORA26.7-201ENST00000391288 122 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 OR9P1P-201ENST00000496431 281 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 Y_RNA.686-201ENST00000516548 134 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 AC091178.2-201ENST00000584401 117 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 AC097639.2-201ENST00000603159 172 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
PTCHD1Q96NR3 SNORD114-6-201ENST00000364393 72 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 Y_RNA.353-201ENST00000365440 108 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 EDDM3CP-201ENST00000415977 425 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 AC233266.1-201ENST00000454518 96 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 MIR4662B-201ENST00000579498 81 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 AL353149.1-201ENST00000610667 244 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 AC242852.1-201ENST00000612151 96 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 AC244015.1-201ENST00000622301 99 ntBASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
PTCHD1Q96NR3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 RNU6-851P-201ENST00000384565 107 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 RNA5SP492-201ENST00000411330 114 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 AL445687.1-201ENST00000439946 251 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 AC009238.1-201ENST00000442165 424 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 AC009237.6-201ENST00000446969 424 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 RNU1-131P-201ENST00000458943 161 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 RN7SKP43-201ENST00000516173 320 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 RNU6-126P-201ENST00000516685 103 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 AL137790.1-201ENST00000634283 177 ntBASIC2.75□□□□□ -1.97
PTCHD1Q96NR3 SNORA9.2-201ENST00000365361 133 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 Y_RNA.486-201ENST00000384398 107 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 SNORD20-201ENST00000384550 80 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 RNU6-160P-201ENST00000384591 107 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 RNU6-443P-201ENST00000384780 107 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 HMGN1P7-201ENST00000491722 313 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 RNU6-659P-201ENST00000516454 104 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 RNU1-142P-201ENST00000516682 145 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 MIR6079-201ENST00000635807 62 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 U6.108-201ENST00000637764 58 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 AC018630.2-201ENST00000534866 2403 ntBASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PTCHD1Q96NR3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 MIR1262-201ENST00000408276 93 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 COTL1P1-201ENST00000422309 375 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 NDUFA4P2-201ENST00000489989 244 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 RN7SL636P-201ENST00000497504 294 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 YWHAEP4-201ENST00000505390 198 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 RNU6-341P-201ENST00000516973 96 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 Y_RNA.757-201ENST00000578934 114 ntBASIC2.73□□□□□ -1.97
PTCHD1Q96NR3 AC131055.1-201ENST00000584626 316 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 217.5 ms