Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MIR561-201ENST00000385216 97 ntBASIC2.39□□□□□ -2.03
CPEB3Q8NE35 AL138827.1-201ENST00000402666 306 ntBASIC2.39□□□□□ -2.03
CPEB3Q8NE35 MTND4LP9-201ENST00000427694 174 ntBASIC2.39□□□□□ -2.03
CPEB3Q8NE35 AC245102.2-201ENST00000448956 180 ntBASIC2.39□□□□□ -2.03
CPEB3Q8NE35 RN7SKP132-201ENST00000516001 208 ntBASIC2.39□□□□□ -2.03
CPEB3Q8NE35 RNU6-667P-201ENST00000517186 102 ntBASIC2.39□□□□□ -2.03
CPEB3Q8NE35 AC112693.2-201ENST00000556538 232 ntBASIC2.39□□□□□ -2.03
CPEB3Q8NE35 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.39□□□□□ -2.03
CPEB3Q8NE35 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.39□□□□□ -2.03
CPEB3Q8NE35 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CPEB3Q8NE35 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.39□□□□□ -2.03
CPEB3Q8NE35 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 RNU6-199P-201ENST00000362954 107 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 SNORA5B-201ENST00000363786 132 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 RNA5SP125-201ENST00000364843 120 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 MIR9-1-201ENST00000385198 89 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 SNORA40-201ENST00000388090 126 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.587-201ENST00000391210 103 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 AL590004.2-201ENST00000404787 371 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 AL512604.1-201ENST00000404812 257 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 RNU6-62P-201ENST00000516526 102 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 MIR3646-201ENST00000578301 84 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 MIR3670-2-201ENST00000582974 65 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 MIR3670-1-201ENST00000584160 65 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 MIR3670-3-201ENST00000584855 65 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 AL031274.2-201ENST00000599419 203 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 MIR3670-4-201ENST00000612260 65 ntBASIC2.38□□□□□ -2.03
CPEB3Q8NE35 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
CPEB3Q8NE35 RNY1P11-201ENST00000363759 113 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.203-201ENST00000364106 102 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 RNU1-96P-201ENST00000364163 162 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.393-201ENST00000383936 102 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 RNU6-484P-201ENST00000384016 107 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.420-201ENST00000384043 110 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 RNU6-417P-201ENST00000384712 107 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 HMGN2P34-201ENST00000437647 269 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 AC092991.1-201ENST00000477176 376 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 AL365222.1-201ENST00000614661 98 ntBASIC2.37□□□□□ -2.03
CPEB3Q8NE35 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
CPEB3Q8NE35 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CPEB3Q8NE35 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.36□□□□□ -2.03
CPEB3Q8NE35 SNORA80A-201ENST00000363922 136 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.218-201ENST00000364218 104 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.521-201ENST00000384560 114 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 SNORA22C-201ENST00000384614 134 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 SNORD37.2-201ENST00000391075 66 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 MIR1253-201ENST00000408273 105 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 RNA5SP21-201ENST00000410917 96 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 AC063976.3-201ENST00000426849 329 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 AC104389.3-201ENST00000445629 235 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 RPS27P1-201ENST00000450552 247 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 AC011406.1-201ENST00000512440 370 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 RNU6-313P-201ENST00000516317 112 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 RNU6-971P-201ENST00000516920 106 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 RNU7-128P-201ENST00000517247 62 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 AC011604.1-201ENST00000545978 196 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 GTF3AP2-201ENST00000557014 266 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 AL049861.1-201ENST00000603130 150 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 MIR6844-201ENST00000637122 62 ntBASIC2.36□□□□□ -2.03
CPEB3Q8NE35 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CPEB3Q8NE35 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CPEB3Q8NE35 snoU2-30.2-201ENST00000362805 70 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.796-201ENST00000364268 102 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.799-201ENST00000364992 102 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 SNORA25B-201ENST00000365507 128 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 RNU6-1168P-201ENST00000390831 104 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 RNU6-1154P-201ENST00000391001 104 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 RNU2-55P-201ENST00000411146 174 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.35□□□□□ -2.03
CPEB3Q8NE35 AC011753.1-201ENST00000451001 220 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 SNORD11-201ENST00000459124 84 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 RNU6-197P-201ENST00000516680 100 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 MIR378D2-201ENST00000580636 98 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 AL449363.1-201ENST00000617815 186 ntBASIC2.35□□□□□ -2.03
CPEB3Q8NE35 RNU6-859P-201ENST00000362728 107 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.111-201ENST00000363248 100 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.251-201ENST00000364551 99 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 RNU6-597P-201ENST00000365620 102 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.432-201ENST00000384087 111 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 Y_RNA.542-201ENST00000384641 111 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 RNU6-588P-201ENST00000410281 105 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 SRIP3-201ENST00000413200 219 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 AL353689.1-201ENST00000438895 199 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 RPS29P21-201ENST00000496272 170 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 RNU6-1146P-201ENST00000516282 102 ntBASIC2.34□□□□□ -2.03
CPEB3Q8NE35 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.34□□□□□ -2.03
CPEB3Q8NE35 AL160236.1-201ENST00000556317 195 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms