Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RPS26P55-201ENST00000471178 356 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 AC079140.2-201ENST00000506193 142 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 RNU6-107P-201ENST00000516643 102 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.52□□□□□ -2.17
RTL3Q8N8U3 AC015720.1-201ENST00000565251 277 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 MIR4300-201ENST00000581016 96 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.52□□□□□ -2.17
RTL3Q8N8U3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.162-201ENST00000363683 102 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 SNORD115-30-201ENST00000364117 82 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AL355796.1-201ENST00000406706 323 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AL358176.2-201ENST00000425769 204 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 SUMO1P2-201ENST00000452524 304 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 RNU6-1046P-201ENST00000516538 107 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 RNU6-902P-201ENST00000517212 91 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AL117187.1-201ENST00000555482 181 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AC136443.5-201ENST00000603741 370 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AL121890.5-201ENST00000620848 304 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 AC127459.3-201ENST00000624328 466 ntBASIC1.51□□□□□ -2.17
RTL3Q8N8U3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.143-201ENST00000363520 106 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.152-201ENST00000363578 100 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 RNU6-770P-201ENST00000363929 105 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.210-201ENST00000364161 110 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.222-201ENST00000364264 102 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 SNORD1A-201ENST00000364968 72 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 RNU6-1175P-201ENST00000365200 107 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.446-201ENST00000384178 104 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 RNU6-937P-201ENST00000384325 106 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 RNA5SP323-201ENST00000391094 133 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 RNU6-1109P-201ENST00000391187 107 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 MTND2P23-201ENST00000422990 651 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 AL731563.1-201ENST00000442202 214 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 LINC01399-202ENST00000458450 244 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 MRPS35P2-201ENST00000508242 191 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 AC010598.1-201ENST00000510378 103 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 RNU6-1143P-201ENST00000516125 104 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 RNU6-397P-201ENST00000516226 104 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 MIR3937-201ENST00000580135 106 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 PRR13P7-201ENST00000605538 430 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
RTL3Q8N8U3 WWP1P1-201ENST00000466609 2769 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
RTL3Q8N8U3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.26-201ENST00000362539 101 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 SNORD81.1-201ENST00000363064 77 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 SNORA20B-201ENST00000384220 132 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 RNU6-417P-201ENST00000384712 107 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.49□□□□□ -2.17
RTL3Q8N8U3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.49□□□□□ -2.17
RTL3Q8N8U3 AL118496.2-201ENST00000448300 230 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 AC005042.3-201ENST00000453230 174 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 RNU6-327P-201ENST00000516270 127 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 RNU6-1045P-201ENST00000516321 107 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 RNU7-128P-201ENST00000517247 62 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 MIR4709-201ENST00000577272 72 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 AC008737.2-201ENST00000599446 118 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 MIR376A1-201ENST00000616574 68 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 U6.108-201ENST00000637764 58 ntBASIC1.49□□□□□ -2.17
RTL3Q8N8U3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.49□□□□□ -2.17
RTL3Q8N8U3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RTL3Q8N8U3 SNORA27.1-201ENST00000362604 124 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 RNU6-1266P-201ENST00000362794 105 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.133-201ENST00000363428 110 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 RNU6-806P-201ENST00000365147 105 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 RNU6-1105P-201ENST00000384774 107 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 RNU2-61P-201ENST00000411069 191 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
RTL3Q8N8U3 HSPE1P25-201ENST00000455484 251 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.48□□□□□ -2.17
RTL3Q8N8U3 RNU6-496P-201ENST00000516145 99 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 RNU6-436P-201ENST00000516171 114 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC019176.1-201ENST00000518519 225 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC011373.1-201ENST00000607270 237 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 U6.73-201ENST00000619194 103 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC095038.3-201ENST00000634439 195 ntBASIC1.48□□□□□ -2.17
RTL3Q8N8U3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RTL3Q8N8U3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.47□□□□□ -2.17
RTL3Q8N8U3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RTL3Q8N8U3 MIR302D-201ENST00000362275 68 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.19-201ENST00000362462 99 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
RTL3Q8N8U3 MIR873-201ENST00000401120 77 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 RPL23AP36-201ENST00000413895 458 ntBASIC1.47□□□□□ -2.17
RTL3Q8N8U3 AC108667.1-201ENST00000428618 249 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms