Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC024995.1-201ENST00000523014 93 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 AC024405.2-202ENST00000532731 184 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 MIR548AY-201ENST00000617669 107 ntBASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SYNPOQ8N3V7 MIR411-201ENST00000362239 96 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 RNA5SP276-201ENST00000362580 94 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 RNU6-1205P-201ENST00000363625 106 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.292-201ENST00000364904 97 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 RNU1-51P-201ENST00000365345 176 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 RNU6-886P-201ENST00000384319 105 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 Z98742.3-201ENST00000418637 326 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 AL138752.1-201ENST00000452964 351 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.644-201ENST00000459006 113 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.638-201ENST00000459374 113 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.674-201ENST00000516362 113 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 AC084364.2-201ENST00000546924 395 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 MIR4635-201ENST00000583759 79 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 AC011921.3-201ENST00000605540 361 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 U1.36-201ENST00000620684 176 ntBASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.61□□□□□ -1.99
SYNPOQ8N3V7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.199-201ENST00000364014 102 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 RNY4P28-201ENST00000365281 93 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 RPS4XP11-201ENST00000446897 772 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 RNU7-128P-201ENST00000517247 62 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 RNU2-19P-201ENST00000517288 84 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 IGKV3-31-201ENST00000523109 329 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 MIR5692C2-201ENST00000577959 77 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 MIR4524B-201ENST00000581569 115 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 MIR4282-201ENST00000583613 67 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 AC078899.2-201ENST00000595282 212 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 AC013791.1-201ENST00000616619 62 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 AC073349.3-201ENST00000617616 186 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 MIR6079-201ENST00000635807 62 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 U6.108-201ENST00000637764 58 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 AC018630.2-201ENST00000534866 2403 ntBASIC2.6□□□□□ -1.99
SYNPOQ8N3V7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.82-201ENST00000363000 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.92-201ENST00000363043 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.235-201ENST00000364412 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.306-201ENST00000365015 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.312-201ENST00000365089 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.322-201ENST00000365151 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.793-201ENST00000411222 111 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 RNU4-61P-201ENST00000411243 107 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.626-201ENST00000411288 95 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.650-201ENST00000459002 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 RNU7-115P-201ENST00000516433 55 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 RNU7-116P-201ENST00000516940 62 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.777-201ENST00000516982 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 MIR4648-201ENST00000580107 72 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.771-201ENST00000598668 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 Y_RNA.789-201ENST00000622480 102 ntBASIC2.59□□□□□ -1.99
SYNPOQ8N3V7 MAPK10-266ENST00000641066 6555 ntBASIC2.59□□□□□ -2
SYNPOQ8N3V7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SYNPOQ8N3V7 Y_RNA.270-201ENST00000364693 104 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 MIR520G-201ENST00000385064 90 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 SNORA48.1-201ENST00000390879 135 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 RNA5SP109-201ENST00000391010 116 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 SNORA36B-201ENST00000410438 131 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 RNU7-94P-201ENST00000459576 63 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 COX6CP14-201ENST00000469580 174 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 AC055731.1-201ENST00000474387 401 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 AC011604.1-201ENST00000545978 196 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 AL078604.3-201ENST00000615580 211 ntBASIC2.58□□□□□ -2
SYNPOQ8N3V7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.57□□□□□ -2
SYNPOQ8N3V7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.57□□□□□ -2
SYNPOQ8N3V7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
SYNPOQ8N3V7 RNA5SP289-201ENST00000362332 137 ntBASIC2.57□□□□□ -2
SYNPOQ8N3V7 AC245047.3-201ENST00000429428 127 ntBASIC2.57□□□□□ -2
SYNPOQ8N3V7 RNU7-120P-201ENST00000459334 63 ntBASIC2.57□□□□□ -2
SYNPOQ8N3V7 RPL36AP21-201ENST00000490372 323 ntBASIC2.57□□□□□ -2
SYNPOQ8N3V7 AC107393.1-201ENST00000512403 346 ntBASIC2.57□□□□□ -2
SYNPOQ8N3V7 RNU2-56P-201ENST00000516826 190 ntBASIC2.57□□□□□ -2
SYNPOQ8N3V7 AP003357.1-201ENST00000604497 148 ntBASIC2.57□□□□□ -2
SYNPOQ8N3V7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.57□□□□□ -2
SYNPOQ8N3V7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.57□□□□□ -2
SYNPOQ8N3V7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.57□□□□□ -2
SYNPOQ8N3V7 ZNF702P-202ENST00000434269 1966 ntBASIC2.56□□□□□ -2
SYNPOQ8N3V7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SYNPOQ8N3V7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SYNPOQ8N3V7 RNU6-682P-201ENST00000363843 106 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms