Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
TMEM50BP56557 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
TMEM50BP56557 AC134026.1-201ENST00000623249 2239 ntBASIC1.5□□□□□ -2.17
TMEM50BP56557 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.49□□□□□ -2.17
TMEM50BP56557 Y_RNA.310-201ENST00000365063 113 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 RNU6-662P-201ENST00000384253 104 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 MIR934-201ENST00000401241 83 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 AC010154.1-201ENST00000425857 269 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 AC003989.2-201ENST00000440224 169 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 RPS27P1-201ENST00000450552 247 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 RPS20P10-201ENST00000451209 253 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 SUMO1P2-201ENST00000452524 304 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 RPS26P45-201ENST00000471748 340 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 SNORA70.12-201ENST00000516084 153 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 SNORA31.17-201ENST00000516953 127 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 RNU2-31P-201ENST00000516954 155 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.49□□□□□ -2.17
TMEM50BP56557 MIR3618-201ENST00000580330 88 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 AC004832.4-201ENST00000608952 331 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 AL590808.1-201ENST00000618696 141 ntBASIC1.49□□□□□ -2.17
TMEM50BP56557 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
TMEM50BP56557 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TMEM50BP56557 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
TMEM50BP56557 SNORD114-7-201ENST00000362520 77 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 Y_RNA.136-201ENST00000363444 102 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 Y_RNA.144-201ENST00000363521 113 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 RNU6-801P-201ENST00000364087 105 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 Y_RNA.341-201ENST00000365341 102 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 RNU6-196P-201ENST00000384315 107 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 MIR9-3-201ENST00000385084 90 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 RNU2-38P-201ENST00000410856 79 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.48□□□□□ -2.17
TMEM50BP56557 AC091959.1-201ENST00000495857 238 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 RNU6-1291P-201ENST00000516591 104 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 CBX3P4-201ENST00000538909 354 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 AC012433.1-201ENST00000588916 398 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 AC010900.2-201ENST00000604508 210 ntBASIC1.48□□□□□ -2.17
TMEM50BP56557 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.48□□□□□ -2.17
TMEM50BP56557 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.48□□□□□ -2.17
TMEM50BP56557 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
TMEM50BP56557 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
TMEM50BP56557 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TMEM50BP56557 AL391987.6-201ENST00000305671 199 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 Y_RNA.193-201ENST00000363979 102 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 SNORA63D-201ENST00000364359 132 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 Y_RNA.267-201ENST00000364679 109 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 RNU6-326P-201ENST00000365480 107 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 MIR30A-201ENST00000385092 71 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 SNORA26.5-201ENST00000391215 123 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 RNU6-651P-201ENST00000411040 105 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 HSPE1P9-201ENST00000440046 311 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 HSPE1P13-201ENST00000451143 297 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 U8.19-201ENST00000459095 133 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.47□□□□□ -2.17
TMEM50BP56557 SERF1AP1-201ENST00000514575 187 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 SNORA31.10-201ENST00000516482 106 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 AC024995.1-201ENST00000523014 93 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 MIR4285-201ENST00000581001 85 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 AC091178.2-201ENST00000584401 117 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 AC064859.1-201ENST00000624741 174 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 MIR6079-201ENST00000635807 62 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 AC068647.2-201ENST00000637380 353 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 AC068700.1-201ENST00000565862 3754 ntBASIC1.47□□□□□ -2.17
TMEM50BP56557 AC018630.2-201ENST00000534866 2403 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TMEM50BP56557 SNORA25.1-201ENST00000362326 128 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 Y_RNA.117-201ENST00000363294 101 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 U8.7-201ENST00000364940 136 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 Y_RNA.368-201ENST00000365547 113 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 RNU6-463P-201ENST00000384340 107 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 MIR520A-201ENST00000384862 85 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 MIR515-2-201ENST00000384883 83 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 MIR515-1-201ENST00000384884 83 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 SNORA53-201ENST00000391141 249 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 RNU2-7P-201ENST00000410794 178 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 AL445685.2-201ENST00000422551 342 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 OOSP1P1-201ENST00000423265 274 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 AL162725.1-201ENST00000435405 301 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 RPS4XP11-201ENST00000446897 772 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 SNORD127-201ENST00000458892 86 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 RNU6-1278P-201ENST00000516130 107 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 RNU6-1096P-201ENST00000517089 102 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 AC110588.1-201ENST00000559699 137 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.46□□□□□ -2.18
TMEM50BP56557 7SK.10-201ENST00000621414 298 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 AC092881.1-201ENST00000638218 2733 ntBASIC1.46□□□□□ -2.18
TMEM50BP56557 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TMEM50BP56557 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
TMEM50BP56557 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.45□□□□□ -2.18
TMEM50BP56557 MIR449A-201ENST00000362113 91 ntBASIC1.45□□□□□ -2.18
TMEM50BP56557 RNU6-1080P-201ENST00000383982 107 ntBASIC1.45□□□□□ -2.18
TMEM50BP56557 Y_RNA.477-201ENST00000384352 108 ntBASIC1.45□□□□□ -2.18
TMEM50BP56557 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
TMEM50BP56557 RNU6-763P-201ENST00000390865 106 ntBASIC1.45□□□□□ -2.18
TMEM50BP56557 AC019129.1-201ENST00000403786 261 ntBASIC1.45□□□□□ -2.18
TMEM50BP56557 RNU6-710P-201ENST00000410424 105 ntBASIC1.45□□□□□ -2.18
TMEM50BP56557 AC245047.3-201ENST00000429428 127 ntBASIC1.45□□□□□ -2.18
TMEM50BP56557 AC233266.1-201ENST00000454518 96 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms