Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 MIR618-201ENST00000385287 98 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 RNA5SP482-201ENST00000391269 118 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 MIR548K-201ENST00000408406 116 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 RNU4-14P-201ENST00000410858 122 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN4AP35499 Y_RNA.653-201ENST00000459091 95 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 U8.22-201ENST00000459141 133 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 RN7SKP88-201ENST00000516847 250 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 RNU6-341P-201ENST00000516973 96 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 Y_RNA.718-201ENST00000517110 102 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 AC144568.1-201ENST00000520139 137 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN4AP35499 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.78□□□□□ -2.28
SCN4AP35499 AC006600.1-201ENST00000572529 153 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 AC005828.6-201ENST00000606610 232 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 7SK.8-201ENST00000612110 250 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.78□□□□□ -2.28
SCN4AP35499 7SK.11-201ENST00000615477 250 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 7SK.13-201ENST00000622040 250 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 AC099654.5-201ENST00000636479 350 ntBASIC0.78□□□□□ -2.28
SCN4AP35499 SNORA27.1-201ENST00000362604 124 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 Y_RNA.48-201ENST00000362710 103 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 RNU6-318P-201ENST00000384283 103 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 Y_RNA.482-201ENST00000384377 111 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 AC138393.2-201ENST00000414742 246 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 MTND5P15-201ENST00000434246 349 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 AC245047.7-201ENST00000440265 293 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 HAR1A.1-201ENST00000459583 118 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 AC048334.1-201ENST00000477975 159 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 SNORA31.4-201ENST00000516049 129 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 RNU6-264P-201ENST00000517134 104 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 AC027419.1-201ENST00000522976 328 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.78□□□□□ -2.29
SCN4AP35499 AC027279.3-201ENST00000625055 122 ntBASIC0.78□□□□□ -2.29
SCN4AP35499 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.77□□□□□ -2.29
SCN4AP35499 RNU6-1310P-201ENST00000384153 107 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 SNORD116-29-201ENST00000384516 83 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 SNORD12B-201ENST00000410433 91 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 RAB28P5-201ENST00000427490 651 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 LINC01399-202ENST00000458450 244 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.77□□□□□ -2.29
SCN4AP35499 RNU7-12P-201ENST00000516030 62 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 RNU6-436P-201ENST00000516171 114 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 RNU6-1016P-201ENST00000516689 94 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 Y_RNA.708-201ENST00000516950 96 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 AP003484.1-201ENST00000530974 250 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 AC023442.1-201ENST00000531247 422 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 AC240442.1-201ENST00000616055 283 ntBASIC0.77□□□□□ -2.29
SCN4AP35499 CASC19-280ENST00000642102 1351 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 MIRLET7C-201ENST00000362160 84 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 RNU6-199P-201ENST00000362954 107 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 Y_RNA.265-201ENST00000364677 108 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 RNU6-831P-201ENST00000384548 107 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 RNU6-1031P-201ENST00000384773 107 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 AC016909.1-201ENST00000415916 166 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 AC008134.1-201ENST00000420943 193 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 DYNLT3P2-201ENST00000442517 295 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 RNU7-87P-201ENST00000459343 62 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 RPL39P38-201ENST00000467018 153 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 MTND5P5-201ENST00000503764 376 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 RNU6-1012P-201ENST00000516606 109 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.76□□□□□ -2.29
SCN4AP35499 FRG2DP-202ENST00000566967 323 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 AL357075.2-201ENST00000614906 189 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 AL513423.1-201ENST00000621695 132 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 AC106754.2-201ENST00000623006 233 ntBASIC0.76□□□□□ -2.29
SCN4AP35499 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 RNU6-424P-201ENST00000384367 105 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 MIR19B1-201ENST00000384829 87 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 RNU2-54P-201ENST00000410299 190 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 MTND4P28-201ENST00000426217 387 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 TOMM22P2-201ENST00000430735 237 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 AL353997.1-201ENST00000432936 108 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 AP000870.1-201ENST00000472927 406 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 RNU6-947P-201ENST00000516264 106 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 RNU6-107P-201ENST00000516643 102 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 CYP3A52P-201ENST00000563326 91 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 AL357312.1-201ENST00000603879 298 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 MIR1244-1-201ENST00000612829 85 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 AC025253.1-201ENST00000613623 543 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 MIR1244-3-201ENST00000635744 85 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 MIR1244-2-201ENST00000636449 85 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 MIR1244-4-202ENST00000636813 85 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
SCN4AP35499 Y_RNA.27-201ENST00000362540 103 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 RNU6-1266P-201ENST00000362794 105 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 VTRNA1-3-201ENST00000365645 89 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 Y_RNA.390-201ENST00000383932 102 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 RNU6-910P-201ENST00000390844 107 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 U8.16-201ENST00000391279 133 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 MIR190B-201ENST00000401119 79 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 MIR548F5-201ENST00000408421 86 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.75□□□□□ -2.29
SCN4AP35499 AC010598.1-201ENST00000510378 103 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 SNORA70.12-201ENST00000516084 153 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 RNU7-172P-201ENST00000517125 64 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 AC133104.2-201ENST00000615272 193 ntBASIC0.75□□□□□ -2.29
SCN4AP35499 MIR302D-201ENST00000362275 68 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms