Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 RNU6-389P-201ENST00000517048 105 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 RNU2-12P-201ENST00000517216 168 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.91□□□□□ -2.1
NR1D1P20393 MIR3668-201ENST00000582138 75 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.91□□□□□ -2.1
NR1D1P20393 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
NR1D1P20393 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.91□□□□□ -2.1
NR1D1P20393 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
NR1D1P20393 RNU1-58P-201ENST00000362413 163 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 Y_RNA.136-201ENST00000363444 102 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 Y_RNA.243-201ENST00000364481 109 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 Y_RNA.257-201ENST00000364596 102 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 Y_RNA.331-201ENST00000365267 102 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 Y_RNA.446-201ENST00000384178 104 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 Y_RNA.477-201ENST00000384352 108 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 Y_RNA.552-201ENST00000384665 112 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 MIR597-201ENST00000384968 97 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
NR1D1P20393 RNU6-907P-201ENST00000390924 102 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 SNORA53-201ENST00000391141 249 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 SNORD58.1-201ENST00000391313 66 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 RNU6-1199P-201ENST00000411249 104 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 RPL23AP6-201ENST00000446637 472 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 RNU1-131P-201ENST00000458943 161 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.9□□□□□ -2.11
NR1D1P20393 RNU6-966P-201ENST00000516479 104 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 RNU2-31P-201ENST00000516954 155 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 AP005660.1-201ENST00000522972 293 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 MIR8070-201ENST00000616510 88 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 AC141273.2-201ENST00000618989 130 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 AC006001.4-201ENST00000622243 395 ntBASIC1.9□□□□□ -2.11
NR1D1P20393 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.9□□□□□ -2.11
NR1D1P20393 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NR1D1P20393 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.89□□□□□ -2.11
NR1D1P20393 AL159152.1-201ENST00000635019 2587 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 RNY1P10-201ENST00000363268 113 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 RNU6-454P-201ENST00000364292 107 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 SNORD48-201ENST00000364953 64 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 RNU6-418P-201ENST00000384035 107 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 Y_RNA.569-201ENST00000384749 103 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 AL603910.2-201ENST00000407268 136 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.89□□□□□ -2.11
NR1D1P20393 AC010531.2-201ENST00000465012 153 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.89□□□□□ -2.11
NR1D1P20393 AC010900.2-201ENST00000604508 210 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 AC005828.6-201ENST00000606610 232 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.89□□□□□ -2.11
NR1D1P20393 U2.14-201ENST00000615943 113 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 AC078938.1-201ENST00000620993 318 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 AC006435.5-201ENST00000624486 112 ntBASIC1.89□□□□□ -2.11
NR1D1P20393 RNU6-1266P-201ENST00000362794 105 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 Y_RNA.383-201ENST00000383855 97 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 RNU6-160P-201ENST00000384591 107 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 Y_RNA.539-201ENST00000384635 107 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 RNU6-1248P-201ENST00000391096 64 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 RNU6-57P-201ENST00000411348 103 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 POLR2KP2-201ENST00000438155 177 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 AC003989.2-201ENST00000440224 169 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.88□□□□□ -2.11
NR1D1P20393 RNU6-155P-201ENST00000516347 100 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 RNU6-856P-201ENST00000516959 98 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 SCARNA24.2-201ENST00000516968 130 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.88□□□□□ -2.11
NR1D1P20393 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 AC037487.3-201ENST00000606668 112 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 U6.115-201ENST00000636045 103 ntBASIC1.88□□□□□ -2.11
NR1D1P20393 RNU6-1240P-201ENST00000365155 104 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 Y_RNA.361-201ENST00000365515 120 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 Y_RNA.418-201ENST00000384029 102 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NR1D1P20393 AC024067.1-201ENST00000426199 223 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.87□□□□□ -2.11
NR1D1P20393 AC010598.1-201ENST00000510378 103 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 SNORA70.12-201ENST00000516084 153 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 RNU6-1146P-201ENST00000516282 102 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 RNU6-111P-201ENST00000517179 105 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 AC025647.1-201ENST00000517879 253 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 BX284668.6-201ENST00000606899 438 ntBASIC1.87□□□□□ -2.11
NR1D1P20393 UBE2WP1-201ENST00000362030 340 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 MIR340-201ENST00000362125 95 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 SNORA25.1-201ENST00000362326 128 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 Y_RNA.44-201ENST00000362676 108 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 RNU6-271P-201ENST00000363858 105 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 SNORD27-201ENST00000363981 72 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 SNORD115-30-201ENST00000364117 82 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 RNY1-201ENST00000364228 113 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NR1D1P20393 RNA5SP212-201ENST00000391223 107 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 RNU6-710P-201ENST00000410424 105 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 RNU6-321P-201ENST00000410912 106 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 AC010154.1-201ENST00000425857 269 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.86□□□□□ -2.11
NR1D1P20393 MTCO1P5-201ENST00000433573 344 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 MRPS10P1-201ENST00000448483 130 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 AC016717.1-201ENST00000448918 286 ntBASIC1.86□□□□□ -2.11
NR1D1P20393 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms