Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 RNA5SP126-201ENST00000365092 109 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 RNA5SP138-201ENST00000365098 114 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 SNORA72.4-201ENST00000384174 132 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 SNORD116-13-201ENST00000384408 92 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 Y_RNA.539-201ENST00000384635 107 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 Y_RNA.590-201ENST00000410140 107 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 RNU6-847P-201ENST00000411115 108 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DOBP13765 AL162725.1-201ENST00000435405 301 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 RNU4-71P-201ENST00000516258 113 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 RNU7-128P-201ENST00000517247 62 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 MIR4282-201ENST00000583613 67 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 AC069114.2-201ENST00000604699 304 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DOBP13765 AC245060.5-201ENST00000610778 3293 ntBASIC1.77□□□□□ -2.13
HLA-DOBP13765 U8.2-201ENST00000363156 134 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 Y_RNA.117-201ENST00000363294 101 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 Y_RNA.172-201ENST00000363765 102 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DOBP13765 RNU6-1323P-201ENST00000384025 107 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 SNORA8-201ENST00000384574 139 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 Y_RNA.552-201ENST00000384665 112 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 RNU6-376P-201ENST00000384731 106 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 RNU6-763P-201ENST00000390865 106 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 SNORA48.1-201ENST00000390879 135 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 BTF3P11-201ENST00000426582 477 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 SNORD2.1-201ENST00000458762 69 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 RPS26P45-201ENST00000471748 340 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 TRBV12-1-201ENST00000479785 344 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 Y_RNA.679-201ENST00000516416 91 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 RNU6-63P-201ENST00000516690 95 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 RNU6-111P-201ENST00000517179 105 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 RNU2-19P-201ENST00000517288 84 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 MIR4643-201ENST00000577473 78 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 AC005357.1-201ENST00000588399 301 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 AC073413.2-201ENST00000604332 360 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 AC005972.2-201ENST00000604690 348 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 AC141273.2-201ENST00000618989 130 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 U1.36-201ENST00000620684 176 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 U6.108-201ENST00000637764 58 ntBASIC1.76□□□□□ -2.13
HLA-DOBP13765 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DOBP13765 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DOBP13765 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
HLA-DOBP13765 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DOBP13765 Y_RNA.65-201ENST00000362846 100 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 Y_RNA.122-201ENST00000363331 96 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 SNORA33-201ENST00000363664 130 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNU6-899P-201ENST00000363947 107 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNU4-13P-201ENST00000364019 141 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNY1-201ENST00000364228 113 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNU6-1019P-201ENST00000364424 107 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 MIR520G-201ENST00000385064 90 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 SNORA26.5-201ENST00000391215 123 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 SNORD23.1-201ENST00000408212 104 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNA5SP450-201ENST00000411206 102 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DOBP13765 HSPE1P21-201ENST00000438283 308 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 Y_RNA.637-201ENST00000459424 114 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNU7-94P-201ENST00000459576 63 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNA5SP364-201ENST00000516938 78 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNU7-116P-201ENST00000516940 62 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNU6-388P-201ENST00000517012 105 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 RNU6-389P-201ENST00000517048 105 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 AC015720.1-201ENST00000565251 277 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 MIR4648-201ENST00000580107 72 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 AC073349.3-201ENST00000617616 186 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 AC012640.5-201ENST00000623897 319 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 snoU18.1-201ENST00000629629 71 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 AC068647.2-201ENST00000637380 353 ntBASIC1.75□□□□□ -2.13
HLA-DOBP13765 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DOBP13765 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DOBP13765 AC018630.2-201ENST00000534866 2403 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 RNU6-338P-201ENST00000383888 105 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 Y_RNA.515-201ENST00000384535 112 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 MIR562-201ENST00000384894 95 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 AL355497.1-201ENST00000406262 551 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 RNA5SP511-201ENST00000410487 115 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DOBP13765 AC104332.1-201ENST00000440471 797 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 AC069257.2-201ENST00000441819 155 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 AC079804.2-201ENST00000490376 200 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 MIR5094-201ENST00000578766 85 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 AP003357.1-201ENST00000604497 148 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 AL008718.3-201ENST00000610217 321 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 MIR6840-201ENST00000611937 71 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 AL442067.1-201ENST00000613261 223 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 AC013791.1-201ENST00000616619 62 ntBASIC1.74□□□□□ -2.13
HLA-DOBP13765 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DOBP13765 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DOBP13765 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
HLA-DOBP13765 Y_RNA.76-201ENST00000362931 109 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 Y_RNA.257-201ENST00000364596 102 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 Y_RNA.269-201ENST00000364685 89 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 RNU6-211P-201ENST00000384047 107 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
HLA-DOBP13765 RNU2-14P-201ENST00000411053 191 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms