Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RN7SL853P-201ENST00000617250 223 ntBASIC1.74□□□□□ -2.13
LRRC53A6NM62 Y_RNA.780-201ENST00000617336 101 ntBASIC1.74□□□□□ -2.13
LRRC53A6NM62 Y_RNA.801-201ENST00000619005 101 ntBASIC1.74□□□□□ -2.13
LRRC53A6NM62 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.74□□□□□ -2.13
LRRC53A6NM62 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LRRC53A6NM62 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.73□□□□□ -2.13
LRRC53A6NM62 Y_RNA.267-201ENST00000364679 109 ntBASIC1.73□□□□□ -2.13
LRRC53A6NM62 Y_RNA.383-201ENST00000383855 97 ntBASIC1.73□□□□□ -2.13
LRRC53A6NM62 Y_RNA.422-201ENST00000384054 114 ntBASIC1.73□□□□□ -2.13
LRRC53A6NM62 OOSP1P1-201ENST00000423265 274 ntBASIC1.73□□□□□ -2.13
LRRC53A6NM62 LINC01399-202ENST00000458450 244 ntBASIC1.73□□□□□ -2.13
LRRC53A6NM62 MRPS35P2-201ENST00000508242 191 ntBASIC1.73□□□□□ -2.13
LRRC53A6NM62 RNU6-1291P-201ENST00000516591 104 ntBASIC1.73□□□□□ -2.13
LRRC53A6NM62 AL442663.2-201ENST00000554385 511 ntBASIC1.73□□□□□ -2.13
LRRC53A6NM62 AC100821.1-201ENST00000523153 2479 ntBASIC1.73□□□□□ -2.13
LRRC53A6NM62 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LRRC53A6NM62 Y_RNA.19-201ENST00000362462 99 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 MIR30A-201ENST00000385092 71 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 SNORA12.1-201ENST00000390873 148 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 AL590004.1-201ENST00000405321 300 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 AL162725.1-201ENST00000435405 301 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 JTBP1-201ENST00000441314 247 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 HSPE1P25-201ENST00000455484 251 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 AC005908.1-201ENST00000468701 347 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 AC099513.1-201ENST00000490423 301 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 RNU6-496P-201ENST00000516145 99 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 RNU6-341P-201ENST00000516973 96 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 RNU6-1096P-201ENST00000517089 102 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.72□□□□□ -2.13
LRRC53A6NM62 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 SNORA77B-201ENST00000578179 125 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 MIR3945-201ENST00000581853 98 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 AC006504.6-201ENST00000590142 199 ntBASIC1.72□□□□□ -2.13
LRRC53A6NM62 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LRRC53A6NM62 MIR424-201ENST00000362227 98 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 Y_RNA.64-201ENST00000362845 102 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 Y_RNA.152-201ENST00000363578 100 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 Y_RNA.276-201ENST00000364732 109 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 RNU6-1031P-201ENST00000384773 107 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 MIR215-201ENST00000384858 110 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 RNU11-5P-201ENST00000391216 129 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 AL627390.1-201ENST00000396055 340 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 MIR1267-201ENST00000408723 78 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 RNU6-855P-201ENST00000410395 104 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 RN7SKP200-201ENST00000410564 320 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 RPL21P38-201ENST00000418090 167 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 FTH1P12-201ENST00000432137 551 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 POLR2KP2-201ENST00000438155 177 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.71□□□□□ -2.14
LRRC53A6NM62 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
LRRC53A6NM62 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.71□□□□□ -2.14
LRRC53A6NM62 AC004832.4-201ENST00000608952 331 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 AC021506.2-201ENST00000612354 169 ntBASIC1.71□□□□□ -2.14
LRRC53A6NM62 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.71□□□□□ -2.14
LRRC53A6NM62 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LRRC53A6NM62 SNORA1B-201ENST00000362535 133 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 snoU2_19.2-201ENST00000363024 80 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 Y_RNA.222-201ENST00000364264 102 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 RNU6-1160P-201ENST00000384546 104 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 RNU6-950P-201ENST00000384651 107 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 MIR606-201ENST00000384851 96 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 MIR520G-201ENST00000385064 90 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LRRC53A6NM62 Y_RNA.581-201ENST00000391017 97 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 RNU6-710P-201ENST00000410424 105 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.7□□□□□ -2.14
LRRC53A6NM62 AL135790.2-201ENST00000437701 267 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 RPS4XP11-201ENST00000446897 772 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 RPS20P10-201ENST00000451209 253 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 AC233266.1-201ENST00000454518 96 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 DEFB122-202ENST00000569013 197 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 MIR4255-201ENST00000579351 72 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 AC242852.1-201ENST00000612151 96 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 AC244015.1-201ENST00000622301 99 ntBASIC1.7□□□□□ -2.14
LRRC53A6NM62 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LRRC53A6NM62 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
LRRC53A6NM62 RNU4-80P-201ENST00000363200 141 ntBASIC1.69□□□□□ -2.14
LRRC53A6NM62 SNORA63C-201ENST00000364578 129 ntBASIC1.69□□□□□ -2.14
LRRC53A6NM62 MIR194-1-201ENST00000384892 85 ntBASIC1.69□□□□□ -2.14
LRRC53A6NM62 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
LRRC53A6NM62 AL161935.2-201ENST00000414627 60 ntBASIC1.69□□□□□ -2.14
LRRC53A6NM62 STAG3L5P-204ENST00000443759 179 ntBASIC1.69□□□□□ -2.14
LRRC53A6NM62 HMGN1P10-201ENST00000474557 553 ntBASIC1.69□□□□□ -2.14
LRRC53A6NM62 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRC53A6NM62 MIR502-201ENST00000606349 86 ntBASIC1.69□□□□□ -2.14
LRRC53A6NM62 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LRRC53A6NM62 RNU4-90P-201ENST00000362773 141 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 RNU4-13P-201ENST00000364019 141 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 Y_RNA.310-201ENST00000365063 113 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 Y_RNA.341-201ENST00000365341 102 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 Y_RNA.418-201ENST00000384029 102 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 MIR320A-201ENST00000385302 82 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.68□□□□□ -2.14
LRRC53A6NM62 MTATP8P1-201ENST00000467115 207 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 RNU2-56P-201ENST00000516826 190 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 Y_RNA.720-201ENST00000517166 92 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 AP003733.2-201ENST00000529409 171 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 AP002004.2-201ENST00000531656 154 ntBASIC1.68□□□□□ -2.14
LRRC53A6NM62 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms