Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC012314.7-201ENST00000619693 93 ntBASIC2.76□□□□□ -1.97
SHISA3A0PJX4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SHISA3A0PJX4 SNORA71.3-201ENST00000362582 128 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 SNORD114-6-201ENST00000364393 72 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 RN7SKP123-201ENST00000410732 291 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 AC063976.4-201ENST00000421971 163 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 AL021397.1-201ENST00000451806 248 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 Y_RNA.651-201ENST00000459380 103 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 AL049830.1-201ENST00000468034 425 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.75□□□□□ -1.97
SHISA3A0PJX4 RNA5SP385-201ENST00000515947 110 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 RNA5SP236-201ENST00000516169 116 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 AC091544.4-201ENST00000555268 342 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 MIR7851-201ENST00000610611 160 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 uc_338.25-201ENST00000613756 156 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 AL591926.4-201ENST00000616895 298 ntBASIC2.75□□□□□ -1.97
SHISA3A0PJX4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
SHISA3A0PJX4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SHISA3A0PJX4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SHISA3A0PJX4 SNORA1B-201ENST00000362535 133 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 SNORD46.1-201ENST00000364139 104 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 SNORD116-21-201ENST00000384507 92 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 RNU6-443P-201ENST00000384780 107 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 MIR522-201ENST00000385071 87 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 PRSS3P4-201ENST00000453323 162 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 RN7SL20P-201ENST00000488827 297 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.74□□□□□ -1.97
SHISA3A0PJX4 AC096725.1-201ENST00000514266 313 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 RNU6-693P-201ENST00000516134 107 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 RNU6-1270P-201ENST00000517128 108 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.74□□□□□ -1.97
SHISA3A0PJX4 MIR4506-201ENST00000584693 77 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 AL121890.5-201ENST00000620848 304 ntBASIC2.74□□□□□ -1.97
SHISA3A0PJX4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SHISA3A0PJX4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SHISA3A0PJX4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SHISA3A0PJX4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SHISA3A0PJX4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SHISA3A0PJX4 AL391516.1-201ENST00000554380 2449 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SHISA3A0PJX4 SNORA63.1-201ENST00000362493 131 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 RNU6-508P-201ENST00000363231 103 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 RNA5SP72-201ENST00000364442 117 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 SNORA22-201ENST00000383907 134 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 MIR548A2-201ENST00000384956 97 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 MIR802-201ENST00000390235 94 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 RPS29P6-201ENST00000438196 145 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 Y_RNA.666-201ENST00000516187 112 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 RNU6-781P-201ENST00000516377 101 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 MIR4762-201ENST00000585261 75 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 AC025166.1-201ENST00000612411 163 ntBASIC2.73□□□□□ -1.97
SHISA3A0PJX4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.73□□□□□ -1.97
SHISA3A0PJX4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.73□□□□□ -1.97
SHISA3A0PJX4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SHISA3A0PJX4 MTND5P32-201ENST00000560711 1802 ntBASIC2.72□□□□□ -1.97
SHISA3A0PJX4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SHISA3A0PJX4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SHISA3A0PJX4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHISA3A0PJX4 SNORA33-201ENST00000363664 130 ntBASIC2.72□□□□□ -1.97
SHISA3A0PJX4 U8.5-201ENST00000364528 136 ntBASIC2.72□□□□□ -1.97
SHISA3A0PJX4 RNU6-880P-201ENST00000384526 107 ntBASIC2.72□□□□□ -1.97
SHISA3A0PJX4 MIR1262-201ENST00000408276 93 ntBASIC2.72□□□□□ -1.97
SHISA3A0PJX4 snoU13.22-201ENST00000459428 104 ntBASIC2.72□□□□□ -1.97
SHISA3A0PJX4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.72□□□□□ -1.97
SHISA3A0PJX4 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
SHISA3A0PJX4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHISA3A0PJX4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHISA3A0PJX4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHISA3A0PJX4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
SHISA3A0PJX4 SNORD77.3-201ENST00000391113 65 ntBASIC2.71□□□□□ -1.98
SHISA3A0PJX4 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
SHISA3A0PJX4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.71□□□□□ -1.98
SHISA3A0PJX4 AL445687.1-201ENST00000439946 251 ntBASIC2.71□□□□□ -1.98
SHISA3A0PJX4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.71□□□□□ -1.98
SHISA3A0PJX4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.71□□□□□ -1.98
SHISA3A0PJX4 AL163195.1-201ENST00000496941 348 ntBASIC2.71□□□□□ -1.98
SHISA3A0PJX4 CTSLP2-204ENST00000629029 392 ntBASIC2.71□□□□□ -1.98
SHISA3A0PJX4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SHISA3A0PJX4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHISA3A0PJX4 AC073325.2-201ENST00000339545 159 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 RNA5SP267-201ENST00000364893 126 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 RNU6-442P-201ENST00000383968 104 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 MIR518F-201ENST00000384973 87 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 MIR627-201ENST00000384979 97 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 Y_RNA.649-201ENST00000459077 103 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 RNU6-1149P-201ENST00000516810 97 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 AC026271.5-201ENST00000577873 130 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 MIR5197-201ENST00000583721 112 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 MIR4276-201ENST00000584832 70 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.7□□□□□ -1.98
SHISA3A0PJX4 AC022217.4-201ENST00000604389 163 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 AC006441.5-201ENST00000612680 209 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.7□□□□□ -1.98
SHISA3A0PJX4 Z83843.1-201ENST00000604070 3685 ntBASIC2.7□□□□□ -1.98
SHISA3A0PJX4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA3A0PJX4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms