Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 RNU6-652P-201ENST00000365488 107 ntBASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 AC104850.1-201ENST00000435940 476 ntBASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 ZNF114P1-201ENST00000453500 292 ntBASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 RPS29P15-201ENST00000458329 171 ntBASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 PRDX4P1-201ENST00000507189 574 ntBASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 SNORA18.4-201ENST00000516440 124 ntBASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 RNU6-410P-201ENST00000517006 107 ntBASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 AC018448.1-201ENST00000552843 316 ntBASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 MIR3152-201ENST00000579801 74 ntBASIC-0.61□□□□□ -2.51
TRAV17A0A0B4J275 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 MIR501-201ENST00000390204 84 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 AC090844.1-201ENST00000422019 156 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 RNU7-62P-201ENST00000458856 62 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 RNU7-138P-201ENST00000459479 64 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 AC105417.1-201ENST00000514691 285 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 SNORD45.4-201ENST00000516629 73 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 AC006380.1-201ENST00000603598 186 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 MTND1P7-201ENST00000632801 297 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 AC010332.2-201ENST00000613083 1904 ntBASIC-0.62□□□□□ -2.51
TRAV17A0A0B4J275 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 SNORD49B-201ENST00000365172 72 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 MIR224-201ENST00000384889 81 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 RNU6-284P-201ENST00000411105 106 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 RNU7-185P-201ENST00000459215 60 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 AC091959.1-201ENST00000495857 238 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 AC026782.1-201ENST00000512952 449 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 RNU6-469P-201ENST00000516253 101 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 SCOCP1-201ENST00000554676 349 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 AC064836.2-201ENST00000609491 462 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 MIR548AZ-201ENST00000616567 95 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 FTX_2.1-201ENST00000618816 94 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 AL158209.2-201ENST00000619266 216 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 AC006504.8-201ENST00000621046 635 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 AC127459.3-201ENST00000624328 466 ntBASIC-0.63□□□□□ -2.51
TRAV17A0A0B4J275 AC106754.1-201ENST00000562632 1513 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 Y_RNA.110-201ENST00000363220 99 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 RNU6-674P-201ENST00000363831 107 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 SNORA51.10-201ENST00000384418 136 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 AC133104.1-201ENST00000429100 218 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 MTCO1P5-201ENST00000433573 344 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 U8.21-201ENST00000459536 136 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 RNU6-897P-201ENST00000517135 105 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 AC022878.1-201ENST00000530684 149 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 MIR3684-201ENST00000579779 74 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 AC016597.2-201ENST00000613256 341 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 AL442067.1-201ENST00000613261 223 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 uc_338.4-201ENST00000616635 176 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 MIR6740-201ENST00000618268 113 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 AL607023.1-201ENST00000620045 248 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 uc_338.36-201ENST00000622331 158 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 MIR4788-201ENST00000639104 80 ntBASIC-0.64□□□□□ -2.51
TRAV17A0A0B4J275 RNU4-68P-201ENST00000364314 141 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 MIR522-201ENST00000385071 87 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 MTCO2P27-201ENST00000420740 428 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 AL365184.2-201ENST00000431139 435 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 SNRPGP10-201ENST00000432323 225 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 AL358934.1-201ENST00000432346 324 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 RNU6-329P-201ENST00000459618 107 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 RNA5SP47-201ENST00000517230 109 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 RNU2-60P-201ENST00000517290 128 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.65□□□□□ -2.51
TRAV17A0A0B4J275 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.66□□□□□ -2.51
TRAV17A0A0B4J275 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 SNORD50B-201ENST00000364995 70 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-108P-201ENST00000365558 107 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 MIR1257-201ENST00000408490 117 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 AC092447.3-201ENST00000426027 686 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 GPR143P-201ENST00000434155 205 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 POLR2KP2-201ENST00000438155 177 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 USP9YP25-201ENST00000457708 443 ntBASIC-0.66□□□□□ -2.52
TRAV17A0A0B4J275 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms