Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 RNU6-1266P-201ENST00000362794 105 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 RNU6-23P-201ENST00000363283 107 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 RNU6-454P-201ENST00000364292 107 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.332-201ENST00000365271 113 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 RNU6-326P-201ENST00000365480 107 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 RNU6-338P-201ENST00000383888 105 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 RNA5SP212-201ENST00000391223 107 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2□□□□□ -2.09
DDX43Q9NXZ2 AC009237.7-201ENST00000447357 229 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 UQCRBP2-201ENST00000447827 297 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 RNU6-625P-201ENST00000459412 107 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 SCARNA24.2-201ENST00000516968 130 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2□□□□□ -2.09
DDX43Q9NXZ2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2□□□□□ -2.09
DDX43Q9NXZ2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2□□□□□ -2.09
DDX43Q9NXZ2 AC005176.2-201ENST00000596933 147 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 AC009779.6-201ENST00000603972 165 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 AC011373.1-201ENST00000607270 237 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 AC091932.3-201ENST00000624223 323 ntBASIC2□□□□□ -2.09
DDX43Q9NXZ2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.136-201ENST00000363444 102 ntBASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 SNORD27-201ENST00000363981 72 ntBASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.277-201ENST00000364754 102 ntBASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 RNU2-44P-201ENST00000516795 194 ntBASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 RNU7-110P-201ENST00000516891 62 ntBASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 RNU6-548P-201ENST00000517083 115 ntBASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 AC008873.1-201ENST00000625051 138 ntBASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.76-201ENST00000362931 109 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 SNORD87-201ENST00000364849 89 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 SNORA26.9-201ENST00000391322 122 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 AL033519.2-201ENST00000403958 392 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 RNA5SP501-201ENST00000410990 112 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 AL390729.2-201ENST00000416137 156 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 RPL23AP63-201ENST00000498752 471 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 RNU2-31P-201ENST00000516954 155 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 RNU2-12P-201ENST00000517216 168 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 AC087441.2-201ENST00000529141 262 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 RPL17P51-201ENST00000605218 238 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 AC011921.3-201ENST00000605540 361 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 AC004467.1-201ENST00000615678 330 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 AC068205.3-201ENST00000636385 468 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
DDX43Q9NXZ2 RNA5SP493-201ENST00000364115 91 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.269-201ENST00000364685 89 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.331-201ENST00000365267 102 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 RNU6-1264P-201ENST00000383891 107 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.498-201ENST00000384460 102 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.569-201ENST00000384749 103 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 MIR548I3-201ENST00000408378 149 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 MIR548I1-201ENST00000408810 149 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 RNU6-651P-201ENST00000411040 105 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 AC123900.1-201ENST00000420390 96 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 MTCO1P5-201ENST00000433573 344 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 Z98949.2-201ENST00000440996 144 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 MRPS10P1-201ENST00000448483 130 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 RNU6-138P-201ENST00000515952 107 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 RNU6-1098P-201ENST00000516772 96 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 AC130289.1-201ENST00000577321 73 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 MIR5006-201ENST00000583027 110 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 BX284668.6-201ENST00000606899 438 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 SNORD11B-201ENST00000607707 90 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 MIR3674-201ENST00000636576 68 ntBASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.97□□□□□ -2.09
DDX43Q9NXZ2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 UBE2WP1-201ENST00000362030 340 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 RNA5SP99-201ENST00000364020 114 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 RNU6-200P-201ENST00000364743 107 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.383-201ENST00000383855 97 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 RNU6-21P-201ENST00000384710 107 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 MIR9-3-201ENST00000385084 90 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 MIR320B2-201ENST00000408479 138 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 RNU2-54P-201ENST00000410299 190 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 AC005042.3-201ENST00000453230 174 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 RNU1-131P-201ENST00000458943 161 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 RNA5SP57-201ENST00000459463 123 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 MIR3169-201ENST00000578032 83 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 MIR4282-201ENST00000583613 67 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 AC245060.5-201ENST00000610778 3293 ntBASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.96□□□□□ -2.1
DDX43Q9NXZ2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.44-201ENST00000362676 108 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 SNORD114-6-201ENST00000364393 72 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.274-201ENST00000364714 101 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.275-201ENST00000364726 110 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 RNU6-740P-201ENST00000364734 105 ntBASIC1.95□□□□□ -2.1
DDX43Q9NXZ2 Y_RNA.361-201ENST00000365515 120 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms