Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC090617.3-201ENST00000573670 475 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 MIR3684-201ENST00000579779 74 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AC012557.2-201ENST00000605919 418 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AC004832.4-201ENST00000608952 331 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 AC127459.3-201ENST00000624328 466 ntBASIC0.56□□□□□ -2.32
TREX1Q9NSU2 MTND5P16-201ENST00000460269 1703 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU6-451P-201ENST00000362921 107 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU6-1059P-201ENST00000363752 98 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNY3P3-201ENST00000363816 102 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU4-41P-201ENST00000364426 143 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU6-1264P-201ENST00000383891 107 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU6-163P-201ENST00000384396 106 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 MIR526A1-201ENST00000384897 85 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 Z98949.2-201ENST00000440996 144 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNU7-87P-201ENST00000459343 62 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC026407.1-201ENST00000518369 204 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AC005730.3-201ENST00000583067 366 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 MIR3942-201ENST00000585264 109 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 AL391903.3-201ENST00000612158 163 ntBASIC0.55□□□□□ -2.32
TREX1Q9NSU2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
TREX1Q9NSU2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.498-201ENST00000384460 102 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 MIR216A-201ENST00000385063 110 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 PIGPP3-201ENST00000425307 415 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AL137792.2-201ENST00000443484 235 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 RNU6-1096P-201ENST00000517089 102 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 RNU1-54P-201ENST00000517181 120 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AC023827.1-201ENST00000569247 97 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.54□□□□□ -2.32
TREX1Q9NSU2 MIR3192-201ENST00000584920 77 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 MIR1321-201ENST00000637766 79 ntBASIC0.54□□□□□ -2.32
TREX1Q9NSU2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.53□□□□□ -2.32
TREX1Q9NSU2 SNORD68-201ENST00000363214 84 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 RNU6-833P-201ENST00000363486 107 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 RNU6-596P-201ENST00000365395 98 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.490-201ENST00000384413 102 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 Y_RNA.621-201ENST00000411065 96 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 ELOCP21-201ENST00000412558 336 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 USP9YP30-201ENST00000430729 455 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AL035398.1-201ENST00000430869 322 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 MTND1P1-201ENST00000445453 368 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 RPS20P10-201ENST00000451209 253 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 PCNPP5-201ENST00000452246 481 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 RNU6-314P-201ENST00000516574 104 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AL512605.2-201ENST00000592972 256 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
TREX1Q9NSU2 MIR6128-201ENST00000615528 109 ntBASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.53□□□□□ -2.32
TREX1Q9NSU2 AL589743.1-201ENST00000551932 2712 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 Y_RNA.51-201ENST00000362725 102 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNA5SP264-201ENST00000363115 107 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNU6-879P-201ENST00000364328 108 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 MIR329-1-201ENST00000385028 80 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 MIR520G-201ENST00000385064 90 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNA5SP475-201ENST00000410568 110 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.52□□□□□ -2.33
TREX1Q9NSU2 snoU13.25-201ENST00000458945 104 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 COX6CP6-201ENST00000490840 228 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.52□□□□□ -2.33
TREX1Q9NSU2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNA5SP436-201ENST00000516020 115 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNU6-63P-201ENST00000516690 95 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC022868.1-201ENST00000517767 391 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC120024.3-201ENST00000603167 156 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AL357075.2-201ENST00000614906 189 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC104260.1-201ENST00000616660 539 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 MIR6779-201ENST00000617283 64 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC022079.1-201ENST00000621546 602 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 U6.115-201ENST00000636045 103 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 AC024614.3-201ENST00000637860 256 ntBASIC0.52□□□□□ -2.33
TREX1Q9NSU2 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 RNU6-1090P-201ENST00000364065 94 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 Y_RNA.336-201ENST00000365307 109 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 SNORD89-201ENST00000390981 114 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 MIR873-201ENST00000401120 77 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 RNU5A-5P-201ENST00000411054 116 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 CYCTP-201ENST00000504253 315 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 SNORA70.12-201ENST00000516084 153 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AC018448.1-201ENST00000552843 316 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AC125232.2-201ENST00000592457 143 ntBASIC0.51□□□□□ -2.33
TREX1Q9NSU2 AC245008.1-201ENST00000608123 476 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 248.7 ms