Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 Y_RNA.418-201ENST00000384029 102 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 SNORA6-201ENST00000384033 151 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.452-201ENST00000384202 108 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.556-201ENST00000384677 113 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 RNU6-417P-201ENST00000384712 107 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 MIR504-201ENST00000385065 83 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 RNU11-3P-201ENST00000391111 133 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 MIR873-201ENST00000401120 77 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 MIR1253-201ENST00000408273 105 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.73□□□□□ -2.13
SIX2Q9NPC8 MRPS10P1-201ENST00000448483 130 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.73□□□□□ -2.13
SIX2Q9NPC8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.73□□□□□ -2.13
SIX2Q9NPC8 RN7SL429P-201ENST00000479090 223 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 RN7SL489P-201ENST00000486185 223 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 RN7SL327P-201ENST00000488659 223 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 AC027419.1-201ENST00000522976 328 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 AC005786.1-201ENST00000588553 154 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 DEFB117-201ENST00000602356 141 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 RN7SL853P-201ENST00000617250 223 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 U6.104-201ENST00000637979 90 ntBASIC1.73□□□□□ -2.13
SIX2Q9NPC8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
SIX2Q9NPC8 AC010615.1-201ENST00000594254 1764 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.136-201ENST00000363444 102 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 RNU6-271P-201ENST00000363858 105 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.569-201ENST00000384749 103 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 RNU2-61P-201ENST00000411069 191 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 OOSP1P1-201ENST00000423265 274 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 YWHAEP4-201ENST00000505390 198 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 SNORA70.12-201ENST00000516084 153 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.668-201ENST00000516233 93 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 RNU6-1338P-201ENST00000516328 91 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 MIR514B-201ENST00000516774 80 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 AP005660.1-201ENST00000522972 293 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.72□□□□□ -2.13
SIX2Q9NPC8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.72□□□□□ -2.13
SIX2Q9NPC8 MIR3145-201ENST00000580727 82 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 MIR3149-201ENST00000584629 83 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 U4.1-201ENST00000620349 87 ntBASIC1.72□□□□□ -2.13
SIX2Q9NPC8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.71□□□□□ -2.13
SIX2Q9NPC8 Y_RNA.193-201ENST00000363979 102 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 RNU6-407P-201ENST00000365280 104 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 RNU6-326P-201ENST00000365480 107 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 RNU6-505P-201ENST00000384427 107 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 SNORA26.9-201ENST00000391322 122 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 SNORD23.1-201ENST00000408212 104 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 RNA5SP450-201ENST00000411206 102 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 AC099677.2-201ENST00000436385 175 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 RPS26P55-201ENST00000471178 356 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 RPS27P22-201ENST00000478056 241 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 RNA5SP20-201ENST00000515976 84 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 RNU2-31P-201ENST00000516954 155 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 DEFB108E-201ENST00000524692 240 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 AC023157.2-201ENST00000540596 141 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.71□□□□□ -2.14
SIX2Q9NPC8 AL137100.2-201ENST00000555786 315 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 MIR4529-201ENST00000578110 78 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 MIR3683-201ENST00000580847 82 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 U6.73-201ENST00000619194 103 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 AC012640.5-201ENST00000623897 319 ntBASIC1.71□□□□□ -2.14
SIX2Q9NPC8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.71□□□□□ -2.14
SIX2Q9NPC8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SIX2Q9NPC8 MIR335-201ENST00000362173 94 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 RNU6-862P-201ENST00000362804 105 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 RNU4-80P-201ENST00000363200 141 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 Y_RNA.237-201ENST00000364439 102 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 Y_RNA.288-201ENST00000364854 92 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 RNU6-702P-201ENST00000364982 107 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SIX2Q9NPC8 SNORA53-201ENST00000391141 249 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SIX2Q9NPC8 CST2P1-201ENST00000425770 87 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 MTCO1P5-201ENST00000433573 344 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 SERF1AP1-201ENST00000514575 187 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 MIR4438-201ENST00000585271 93 ntBASIC1.7□□□□□ -2.14
SIX2Q9NPC8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.7□□□□□ -2.14
SIX2Q9NPC8 AL391987.6-201ENST00000305671 199 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 SNORA33-201ENST00000363664 130 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 RNU1-96P-201ENST00000364163 162 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 RNA5SP467-201ENST00000391274 118 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 MTND4LP30-201ENST00000454092 297 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 SNORD127-201ENST00000458892 86 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 AC055731.1-201ENST00000474387 401 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 AC097462.1-201ENST00000514125 324 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 SCARNA24.2-201ENST00000516968 130 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 RNU2-19P-201ENST00000517288 84 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 AC004817.2-201ENST00000561794 651 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 AC037487.3-201ENST00000606668 112 ntBASIC1.69□□□□□ -2.14
SIX2Q9NPC8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
SIX2Q9NPC8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SIX2Q9NPC8 SNORA25.1-201ENST00000362326 128 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 RNU1-22P-201ENST00000363334 158 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 MIR515-2-201ENST00000384883 83 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 MIR515-1-201ENST00000384884 83 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 MIR320A-201ENST00000385302 82 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 SNORA48.1-201ENST00000390879 135 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 MIR1323-201ENST00000408090 73 ntBASIC1.68□□□□□ -2.14
SIX2Q9NPC8 RNU6-710P-201ENST00000410424 105 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms