Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 MIR4648-201ENST00000580107 72 ntBASIC1.53□□□□□ -2.16
Q9N2K0 MIR3171-201ENST00000584270 74 ntBASIC1.53□□□□□ -2.16
Q9N2K0 SNORA28-201ENST00000606769 126 ntBASIC1.53□□□□□ -2.16
Q9N2K0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.53□□□□□ -2.16
Q9N2K0 MIR424-201ENST00000362227 98 ntBASIC1.52□□□□□ -2.17
Q9N2K0 RNU6-1123P-201ENST00000362347 106 ntBASIC1.52□□□□□ -2.17
Q9N2K0 Y_RNA.331-201ENST00000365267 102 ntBASIC1.52□□□□□ -2.17
Q9N2K0 Y_RNA.389-201ENST00000383924 113 ntBASIC1.52□□□□□ -2.17
Q9N2K0 RNU6-21P-201ENST00000384710 107 ntBASIC1.52□□□□□ -2.17
Q9N2K0 RNU6-823P-201ENST00000391042 103 ntBASIC1.52□□□□□ -2.17
Q9N2K0 Y_RNA.645-201ENST00000391229 102 ntBASIC1.52□□□□□ -2.17
Q9N2K0 MIR1252-201ENST00000408861 65 ntBASIC1.52□□□□□ -2.17
Q9N2K0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.52□□□□□ -2.17
Q9N2K0 AC024067.1-201ENST00000426199 223 ntBASIC1.52□□□□□ -2.17
Q9N2K0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.52□□□□□ -2.17
Q9N2K0 RNU7-28P-201ENST00000516759 62 ntBASIC1.52□□□□□ -2.17
Q9N2K0 RNU7-110P-201ENST00000516891 62 ntBASIC1.52□□□□□ -2.17
Q9N2K0 Y_RNA.715-201ENST00000517082 110 ntBASIC1.52□□□□□ -2.17
Q9N2K0 AC020661.2-201ENST00000560114 134 ntBASIC1.52□□□□□ -2.17
Q9N2K0 SNORA77B-201ENST00000578179 125 ntBASIC1.52□□□□□ -2.17
Q9N2K0 AC091178.2-201ENST00000584401 117 ntBASIC1.52□□□□□ -2.17
Q9N2K0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.52□□□□□ -2.17
Q9N2K0 AC100821.1-201ENST00000523153 2479 ntBASIC1.52□□□□□ -2.17
Q9N2K0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.51□□□□□ -2.17
Q9N2K0 SNORD33-201ENST00000362761 85 ntBASIC1.51□□□□□ -2.17
Q9N2K0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.51□□□□□ -2.17
Q9N2K0 RNU6-1227P-201ENST00000383981 107 ntBASIC1.51□□□□□ -2.17
Q9N2K0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.51□□□□□ -2.17
Q9N2K0 AL161935.2-201ENST00000414627 60 ntBASIC1.51□□□□□ -2.17
Q9N2K0 AC005534.2-201ENST00000431047 433 ntBASIC1.51□□□□□ -2.17
Q9N2K0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.51□□□□□ -2.17
Q9N2K0 snoU13.15-201ENST00000459407 104 ntBASIC1.51□□□□□ -2.17
Q9N2K0 AC091021.1-201ENST00000468051 388 ntBASIC1.51□□□□□ -2.17
Q9N2K0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.51□□□□□ -2.17
Q9N2K0 RNU6-436P-201ENST00000516171 114 ntBASIC1.51□□□□□ -2.17
Q9N2K0 AP002004.2-201ENST00000531656 154 ntBASIC1.51□□□□□ -2.17
Q9N2K0 AL929325.1-201ENST00000603096 117 ntBASIC1.51□□□□□ -2.17
Q9N2K0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.51□□□□□ -2.17
Q9N2K0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Q9N2K0 Y_RNA.183-201ENST00000363882 113 ntBASIC1.5□□□□□ -2.17
Q9N2K0 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
Q9N2K0 MTCYBP6-201ENST00000441810 138 ntBASIC1.5□□□□□ -2.17
Q9N2K0 SEPT14P8-201ENST00000508026 178 ntBASIC1.5□□□□□ -2.17
Q9N2K0 SNORA31.10-201ENST00000516482 106 ntBASIC1.5□□□□□ -2.17
Q9N2K0 RNU6-1337P-201ENST00000516525 95 ntBASIC1.5□□□□□ -2.17
Q9N2K0 RNU2-56P-201ENST00000516826 190 ntBASIC1.5□□□□□ -2.17
Q9N2K0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.5□□□□□ -2.17
Q9N2K0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Q9N2K0 MIR3618-201ENST00000580330 88 ntBASIC1.5□□□□□ -2.17
Q9N2K0 MIR4524B-201ENST00000581569 115 ntBASIC1.5□□□□□ -2.17
Q9N2K0 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
Q9N2K0 AL356055.1-201ENST00000602528 446 ntBASIC1.5□□□□□ -2.17
Q9N2K0 AC104695.3-201ENST00000604052 296 ntBASIC1.5□□□□□ -2.17
Q9N2K0 SNORD113-5-201ENST00000607261 78 ntBASIC1.5□□□□□ -2.17
Q9N2K0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.5□□□□□ -2.17
Q9N2K0 PART1_1.1-201ENST00000611761 217 ntBASIC1.5□□□□□ -2.17
Q9N2K0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.5□□□□□ -2.17
Q9N2K0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.5□□□□□ -2.17
Q9N2K0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
Q9N2K0 Y_RNA.143-201ENST00000363520 106 ntBASIC1.49□□□□□ -2.17
Q9N2K0 RNU6-937P-201ENST00000384325 106 ntBASIC1.49□□□□□ -2.17
Q9N2K0 MIR194-1-201ENST00000384892 85 ntBASIC1.49□□□□□ -2.17
Q9N2K0 AC019129.1-201ENST00000403786 261 ntBASIC1.49□□□□□ -2.17
Q9N2K0 AC004965.1-201ENST00000413033 213 ntBASIC1.49□□□□□ -2.17
Q9N2K0 AL162725.1-201ENST00000435405 301 ntBASIC1.49□□□□□ -2.17
Q9N2K0 HSPE1P21-201ENST00000438283 308 ntBASIC1.49□□□□□ -2.17
Q9N2K0 PGBD4P5-201ENST00000445958 426 ntBASIC1.49□□□□□ -2.17
Q9N2K0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.49□□□□□ -2.17
Q9N2K0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.49□□□□□ -2.17
Q9N2K0 AL355297.3-201ENST00000604082 446 ntBASIC1.49□□□□□ -2.17
Q9N2K0 AL021879.1-201ENST00000611756 288 ntBASIC1.49□□□□□ -2.17
Q9N2K0 AL513423.1-201ENST00000621695 132 ntBASIC1.49□□□□□ -2.17
Q9N2K0 ICE2P2-201ENST00000483823 2787 ntBASIC1.49□□□□□ -2.17
Q9N2K0 WWP1P1-201ENST00000466609 2769 ntBASIC1.48□□□□□ -2.17
Q9N2K0 Y_RNA.152-201ENST00000363578 100 ntBASIC1.48□□□□□ -2.17
Q9N2K0 RNU4-13P-201ENST00000364019 141 ntBASIC1.48□□□□□ -2.17
Q9N2K0 Y_RNA.276-201ENST00000364732 109 ntBASIC1.48□□□□□ -2.17
Q9N2K0 RNU6-338P-201ENST00000383888 105 ntBASIC1.48□□□□□ -2.17
Q9N2K0 MIR1289-2-201ENST00000408360 111 ntBASIC1.48□□□□□ -2.17
Q9N2K0 RNU6-130P-201ENST00000411112 103 ntBASIC1.48□□□□□ -2.17
Q9N2K0 AL445685.2-201ENST00000422551 342 ntBASIC1.48□□□□□ -2.17
Q9N2K0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.48□□□□□ -2.17
Q9N2K0 U8.19-201ENST00000459095 133 ntBASIC1.48□□□□□ -2.17
Q9N2K0 RNU6-1096P-201ENST00000517089 102 ntBASIC1.48□□□□□ -2.17
Q9N2K0 CBX3P4-201ENST00000538909 354 ntBASIC1.48□□□□□ -2.17
Q9N2K0 AC016925.2-201ENST00000605108 242 ntBASIC1.48□□□□□ -2.17
Q9N2K0 AC021506.2-201ENST00000612354 169 ntBASIC1.48□□□□□ -2.17
Q9N2K0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Q9N2K0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.48□□□□□ -2.17
Q9N2K0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Q9N2K0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.47□□□□□ -2.17
Q9N2K0 Y_RNA.267-201ENST00000364679 109 ntBASIC1.47□□□□□ -2.17
Q9N2K0 Y_RNA.329-201ENST00000365209 107 ntBASIC1.47□□□□□ -2.17
Q9N2K0 RNU6-203P-201ENST00000384038 104 ntBASIC1.47□□□□□ -2.17
Q9N2K0 Y_RNA.455-201ENST00000384230 98 ntBASIC1.47□□□□□ -2.17
Q9N2K0 RNU6-1248P-201ENST00000391096 64 ntBASIC1.47□□□□□ -2.17
Q9N2K0 RNU1-78P-201ENST00000391248 165 ntBASIC1.47□□□□□ -2.17
Q9N2K0 RNA5SP482-201ENST00000391269 118 ntBASIC1.47□□□□□ -2.17
Q9N2K0 RPL30P13-201ENST00000418873 348 ntBASIC1.47□□□□□ -2.17
Q9N2K0 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms