Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.22□□□□□ -1.89
CBX8Q9HC52 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CBX8Q9HC52 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.21□□□□□ -1.9
CBX8Q9HC52 RNA5SP126-201ENST00000365092 109 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 RNU6-215P-201ENST00000365169 102 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 Y_RNA.432-201ENST00000384087 111 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 RNU4-47P-201ENST00000410876 114 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 RNA5SP120-201ENST00000410900 112 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 CYCSP49-201ENST00000420810 319 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 AC060773.1-201ENST00000421698 310 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 SNORD11-201ENST00000459124 84 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 RNU6-991P-201ENST00000516168 107 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 AP001328.1-201ENST00000528550 176 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 MIR5680-201ENST00000577577 84 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 U6.73-201ENST00000619194 103 ntBASIC3.21□□□□□ -1.9
CBX8Q9HC52 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CBX8Q9HC52 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CBX8Q9HC52 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CBX8Q9HC52 RN7SKP220-201ENST00000410611 288 ntBASIC3.2□□□□□ -1.9
CBX8Q9HC52 AC003982.1-202ENST00000469928 248 ntBASIC3.2□□□□□ -1.9
CBX8Q9HC52 RNU4-57P-201ENST00000515980 135 ntBASIC3.2□□□□□ -1.9
CBX8Q9HC52 SNORD77.4-201ENST00000516158 81 ntBASIC3.2□□□□□ -1.9
CBX8Q9HC52 AL359881.1-201ENST00000602916 267 ntBASIC3.2□□□□□ -1.9
CBX8Q9HC52 U7.2-201ENST00000607576 63 ntBASIC3.2□□□□□ -1.9
CBX8Q9HC52 AC011603.4-201ENST00000611325 277 ntBASIC3.2□□□□□ -1.9
CBX8Q9HC52 uc_338.4-201ENST00000616635 176 ntBASIC3.2□□□□□ -1.9
CBX8Q9HC52 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.19□□□□□ -1.9
CBX8Q9HC52 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CBX8Q9HC52 Y_RNA.796-201ENST00000364268 102 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 Y_RNA.799-201ENST00000364992 102 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.19□□□□□ -1.9
CBX8Q9HC52 AC245047.4-201ENST00000433189 144 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.19□□□□□ -1.9
CBX8Q9HC52 SNORA4.4-201ENST00000515921 135 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 RNU6-1299P-201ENST00000516316 100 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 RNU6-659P-201ENST00000516454 104 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 RNU2-56P-201ENST00000516826 190 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 AC011604.1-201ENST00000545978 196 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.19□□□□□ -1.9
CBX8Q9HC52 RPL23AP91-201ENST00000569211 455 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 MIR2681-201ENST00000581814 105 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.19□□□□□ -1.9
CBX8Q9HC52 AC097639.2-201ENST00000603159 172 ntBASIC3.19□□□□□ -1.9
CBX8Q9HC52 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
CBX8Q9HC52 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CBX8Q9HC52 AC138915.1-201ENST00000565427 1685 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
CBX8Q9HC52 RNU1-96P-201ENST00000364163 162 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 RNU6-915P-201ENST00000364943 103 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 RNU6-1336P-201ENST00000383886 109 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 RNU6-220P-201ENST00000390919 107 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.18□□□□□ -1.9
CBX8Q9HC52 AC018868.1-201ENST00000491307 315 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 CKS1BP2-201ENST00000497342 240 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 RNU6-237P-201ENST00000515985 71 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 RNA5SP153-201ENST00000516498 76 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 Y_RNA.686-201ENST00000516548 134 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 AC103988.1-201ENST00000566382 2177 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CBX8Q9HC52 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CBX8Q9HC52 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.18□□□□□ -1.9
CBX8Q9HC52 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CBX8Q9HC52 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.17□□□□□ -1.9
CBX8Q9HC52 AC093010.3-201ENST00000570269 15214 ntBASIC3.17□□□□□ -1.9
CBX8Q9HC52 RNU6-1209P-201ENST00000363655 107 ntBASIC3.17□□□□□ -1.9
CBX8Q9HC52 Y_RNA.563-201ENST00000384707 108 ntBASIC3.17□□□□□ -1.9
CBX8Q9HC52 MIR562-201ENST00000384894 95 ntBASIC3.17□□□□□ -1.9
CBX8Q9HC52 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.17□□□□□ -1.9
CBX8Q9HC52 RN7SL504P-201ENST00000494496 287 ntBASIC3.17□□□□□ -1.9
CBX8Q9HC52 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.17□□□□□ -1.9
CBX8Q9HC52 SNORA9.3-201ENST00000516383 129 ntBASIC3.17□□□□□ -1.9
CBX8Q9HC52 MIR8057-201ENST00000620957 69 ntBASIC3.17□□□□□ -1.9
CBX8Q9HC52 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
CBX8Q9HC52 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.17□□□□□ -1.9
CBX8Q9HC52 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CBX8Q9HC52 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CBX8Q9HC52 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CBX8Q9HC52 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CBX8Q9HC52 SNORA9.2-201ENST00000365361 133 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 SNORD21-201ENST00000383953 95 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 MIR592-201ENST00000384959 97 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 RNU2-63P-201ENST00000410792 194 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 AC003685.2-201ENST00000422795 395 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 HMGN2P34-201ENST00000437647 269 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 RNU7-128P-201ENST00000517247 62 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.16□□□□□ -1.9
CBX8Q9HC52 EIF4BP1-201ENST00000554881 351 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 MIR3605-201ENST00000583214 100 ntBASIC3.16□□□□□ -1.9
CBX8Q9HC52 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
CBX8Q9HC52 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CBX8Q9HC52 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CBX8Q9HC52 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.15□□□□□ -1.9
CBX8Q9HC52 Y_RNA.91-201ENST00000363042 107 ntBASIC3.15□□□□□ -1.91
CBX8Q9HC52 Y_RNA.634-201ENST00000364811 113 ntBASIC3.15□□□□□ -1.91
CBX8Q9HC52 U8.9-201ENST00000365667 134 ntBASIC3.15□□□□□ -1.91
CBX8Q9HC52 Y_RNA.584-201ENST00000391090 114 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 268.6 ms