Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC018630.2-201ENST00000534866 2403 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 RNU6-407P-201ENST00000365280 104 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 SNORD63-201ENST00000384262 68 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.485-201ENST00000384395 102 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.570-201ENST00000384750 101 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 RNU2-20P-201ENST00000410425 191 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 AL354751.2-201ENST00000415471 210 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 COX6CP10-201ENST00000416832 224 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 AC005002.2-201ENST00000438228 269 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 RPS27P1-201ENST00000450552 247 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 HSPE1P13-201ENST00000451143 297 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 AC008834.1-201ENST00000511612 175 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 RNU6-250P-201ENST00000516958 103 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.711-201ENST00000516993 102 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 AC027419.1-201ENST00000522976 328 ntBASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.101-201ENST00000363154 102 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.148-201ENST00000363557 117 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 RNU4-76P-201ENST00000364509 141 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.446-201ENST00000384178 104 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.471-201ENST00000384312 102 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 RNU6-308P-201ENST00000390957 107 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 RNU4-62P-201ENST00000410125 130 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 AP1B1P2-201ENST00000416196 106 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 RPEP5-201ENST00000441137 268 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 JTBP1-201ENST00000441314 247 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.394-201ENST00000383942 103 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 RPL21P1-201ENST00000399532 476 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 MRPL42P3-201ENST00000401492 326 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 AC005042.3-201ENST00000453230 174 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 AC005840.1-201ENST00000498412 377 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 TRMT112P2-201ENST00000512910 132 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.701-201ENST00000516812 110 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 MIR4709-201ENST00000577272 72 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 AL162424.1-201ENST00000602325 221 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 AC022217.4-201ENST00000604389 163 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 AC127459.3-201ENST00000624328 466 ntBASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.138-201ENST00000363462 102 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.269-201ENST00000364685 89 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 RNU6-1175P-201ENST00000365200 107 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.380-201ENST00000365663 111 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 MIR499A-201ENST00000384903 122 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 RNA5SP109-201ENST00000391010 116 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 AL031003.1-201ENST00000404229 172 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 MIR1267-201ENST00000408723 78 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 RN7SKP200-201ENST00000410564 320 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 RNU6-1199P-201ENST00000411249 104 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 MTND1P14-201ENST00000427400 950 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 AC245047.3-201ENST00000429428 127 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 RNU6-155P-201ENST00000516347 100 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 AC073413.2-201ENST00000604332 360 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 AC124312.5-201ENST00000604451 268 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 MIR6079-201ENST00000635807 62 ntBASIC1.73□□□□□ -2.13
POLR1BQ9H9Y6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.158-201ENST00000363651 101 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 Y_RNA.202-201ENST00000364083 110 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 RNU6-117P-201ENST00000365415 107 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 SNORA22B-201ENST00000383876 138 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 RNU6-376P-201ENST00000384731 106 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 MIR934-201ENST00000401241 83 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 RNU6-101P-201ENST00000410323 104 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 MIR3171-201ENST00000584270 74 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 MIR8070-201ENST00000616510 88 ntBASIC1.72□□□□□ -2.13
POLR1BQ9H9Y6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
POLR1BQ9H9Y6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 RNU6-439P-201ENST00000384188 106 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 RNU6-505P-201ENST00000384427 107 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 MIR520G-201ENST00000385064 90 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 Y_RNA.645-201ENST00000391229 102 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 MIR1252-201ENST00000408861 65 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 RNU6-710P-201ENST00000410424 105 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 RNU2-61P-201ENST00000411069 191 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 RNU6-436P-201ENST00000516171 114 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 RNU6-341P-201ENST00000516973 96 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 Y_RNA.715-201ENST00000517082 110 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 AL358944.1-201ENST00000528537 144 ntBASIC1.71□□□□□ -2.14
POLR1BQ9H9Y6 AC020661.2-201ENST00000560114 134 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 254 ms