Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SNORA31.10-201ENST00000516482 106 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.97□□□□□ -2.25
FOXC2Q99958 AC004584.2-201ENST00000570407 410 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 UBE2V2P2-201ENST00000587677 504 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 AL390123.1-201ENST00000603216 237 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 AC113139.1-201ENST00000605049 239 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 AC005828.6-201ENST00000606610 232 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 PISRT1.1-201ENST00000616930 107 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 AC006435.5-201ENST00000624486 112 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 AC008133.2-201ENST00000624540 351 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
FOXC2Q99958 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.97□□□□□ -2.25
FOXC2Q99958 Y_RNA.142-201ENST00000363491 102 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 RNU6-99P-201ENST00000364721 107 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 Y_RNA.361-201ENST00000365515 120 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 RNA5SP259-201ENST00000365541 109 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 SNORD116-29-201ENST00000384516 83 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 AL355796.1-201ENST00000406706 323 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 MIR1253-201ENST00000408273 105 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 PGBD4P5-201ENST00000445958 426 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 UBE2V1P7-201ENST00000446395 340 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 PCNPP5-201ENST00000452246 481 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 MTCO3P10-201ENST00000455912 772 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 RNU7-34P-201ENST00000459394 64 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.96□□□□□ -2.26
FOXC2Q99958 AC091951.2-201ENST00000500762 203 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.96□□□□□ -2.26
FOXC2Q99958 AC010598.1-201ENST00000510378 103 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 RNU6-307P-201ENST00000516743 106 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 RN7SKP88-201ENST00000516847 250 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 MIR2355-201ENST00000517199 87 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 AC018448.1-201ENST00000552843 316 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 MIR5690-201ENST00000583739 73 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
FOXC2Q99958 AL132765.2-201ENST00000610812 351 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 7SK.8-201ENST00000612110 250 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 AL359075.3-201ENST00000613288 217 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 AC025253.1-201ENST00000613623 543 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.96□□□□□ -2.26
FOXC2Q99958 7SK.11-201ENST00000615477 250 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 AC104260.1-201ENST00000616660 539 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 7SK.13-201ENST00000622040 250 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 AC138305.3-201ENST00000624988 240 ntBASIC0.96□□□□□ -2.26
FOXC2Q99958 SNORA72.1-201ENST00000363485 129 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 RNU6-454P-201ENST00000364292 107 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 RNU1-133P-201ENST00000364867 167 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 RNU6-890P-201ENST00000384121 107 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 MIR559-201ENST00000385188 96 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 RNA5SP109-201ENST00000391010 116 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.95□□□□□ -2.26
FOXC2Q99958 AC005002.2-201ENST00000438228 269 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 RNU7-152P-201ENST00000458982 64 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.95□□□□□ -2.26
FOXC2Q99958 RNU6-470P-201ENST00000515954 104 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 AC068338.1-201ENST00000565567 176 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 MIR1244-1-201ENST00000612829 85 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 AC091925.1-201ENST00000623204 462 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 MIR1244-3-201ENST00000635744 85 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 MIR1244-2-201ENST00000636449 85 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 MIR1244-4-202ENST00000636813 85 ntBASIC0.95□□□□□ -2.26
FOXC2Q99958 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
FOXC2Q99958 SNORA20B-201ENST00000384220 132 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 RNA5SP323-201ENST00000391094 133 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 MTCYBP4-201ENST00000401524 249 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 Y_RNA.592-201ENST00000410274 109 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 RNU6-1156P-201ENST00000410365 100 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 AC092423.1-201ENST00000430165 186 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 AC022493.2-201ENST00000506122 481 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.94□□□□□ -2.26
FOXC2Q99958 SNORD116-28-201ENST00000516123 91 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 RNU6-875P-201ENST00000516488 106 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 RNU1-142P-201ENST00000516682 145 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 AC022868.1-201ENST00000517767 391 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 AC090821.2-201ENST00000523552 176 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 MIR3684-201ENST00000579779 74 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 AL929325.1-201ENST00000603096 117 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 AL050343.2-201ENST00000607338 280 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 AC021506.2-201ENST00000612354 169 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 MIR8054-201ENST00000620877 86 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.94□□□□□ -2.26
FOXC2Q99958 U6.115-201ENST00000636045 103 ntBASIC0.94□□□□□ -2.26
FOXC2Q99958 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
FOXC2Q99958 SNORD114-7-201ENST00000362520 77 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 Y_RNA.243-201ENST00000364481 109 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 RNU6-117P-201ENST00000365415 107 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 Y_RNA.387-201ENST00000383918 102 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 RNU6-1031P-201ENST00000384773 107 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 MIR1285-1-201ENST00000408593 84 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 MRPS18CP6-201ENST00000423587 223 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 MTND4P28-201ENST00000426217 387 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXC2Q99958 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXC2Q99958 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.93□□□□□ -2.26
FOXC2Q99958 UQCRBP2-201ENST00000447827 297 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 MRPS10P1-201ENST00000448483 130 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 RNU7-87P-201ENST00000459343 62 ntBASIC0.93□□□□□ -2.26
FOXC2Q99958 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXC2Q99958 SNORA40.9-201ENST00000515895 93 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms