Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 Y_RNA.66-201ENST00000362862 102 ntBASIC3.44□□□□□ -1.86
IFT43Q96FT9 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
IFT43Q96FT9 MIR548A1-201ENST00000385041 97 ntBASIC3.44□□□□□ -1.86
IFT43Q96FT9 RNU6-1186P-201ENST00000410429 97 ntBASIC3.44□□□□□ -1.86
IFT43Q96FT9 AF228730.3-201ENST00000436691 102 ntBASIC3.44□□□□□ -1.86
IFT43Q96FT9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.44□□□□□ -1.86
IFT43Q96FT9 AC073413.2-201ENST00000604332 360 ntBASIC3.44□□□□□ -1.86
IFT43Q96FT9 YPEL5P2-201ENST00000605553 359 ntBASIC3.44□□□□□ -1.86
IFT43Q96FT9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
IFT43Q96FT9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.43□□□□□ -1.86
IFT43Q96FT9 MAPK10-362ENST00000641864 4484 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 MTND5P18-201ENST00000445624 1801 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 SNORA38.1-201ENST00000364172 131 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 RNU11-5P-201ENST00000391216 129 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 AC244505.4-201ENST00000434905 287 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 RPS15AP28-201ENST00000435088 386 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 AC018634.1-201ENST00000437554 401 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 SSXP5-201ENST00000443473 287 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 AL021397.1-201ENST00000451806 248 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 BX510359.1-201ENST00000456973 237 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 AC011406.1-201ENST00000512440 370 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 RNU7-99P-201ENST00000516271 62 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 SNORA64.4-201ENST00000516632 81 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 IGKV2-26-201ENST00000518305 343 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 AC007751.1-201ENST00000529260 376 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
IFT43Q96FT9 AC008264.2-201ENST00000610193 3731 ntBASIC3.43□□□□□ -1.86
IFT43Q96FT9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
IFT43Q96FT9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
IFT43Q96FT9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.42□□□□□ -1.86
IFT43Q96FT9 RNA5SP383-201ENST00000362934 120 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 RNU6-32P-201ENST00000383948 107 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 RNU6-13P-201ENST00000384248 107 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 RNU6-12P-201ENST00000384604 107 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 RNU6-41P-201ENST00000384741 107 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 MIR561-201ENST00000385216 97 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.42□□□□□ -1.86
IFT43Q96FT9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.42□□□□□ -1.86
IFT43Q96FT9 AL031737.1-201ENST00000450125 223 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 RPS29P12-201ENST00000460178 152 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 RN7SKP57-201ENST00000517248 293 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 AC007229.1-201ENST00000590455 412 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 AL355297.2-201ENST00000604792 129 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.42□□□□□ -1.86
IFT43Q96FT9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
IFT43Q96FT9 AL136360.1-201ENST00000503377 1900 ntBASIC3.42□□□□□ -1.86
IFT43Q96FT9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
IFT43Q96FT9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
IFT43Q96FT9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
IFT43Q96FT9 snoU2-30.2-201ENST00000362805 70 ntBASIC3.41□□□□□ -1.86
IFT43Q96FT9 RNU6-1292P-201ENST00000383856 107 ntBASIC3.41□□□□□ -1.86
IFT43Q96FT9 AL031121.1-201ENST00000406553 254 ntBASIC3.41□□□□□ -1.86
IFT43Q96FT9 AC245166.1-201ENST00000521012 253 ntBASIC3.41□□□□□ -1.86
IFT43Q96FT9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
IFT43Q96FT9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.41□□□□□ -1.86
IFT43Q96FT9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
IFT43Q96FT9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
IFT43Q96FT9 Z83843.1-201ENST00000604070 3685 ntBASIC3.41□□□□□ -1.86
IFT43Q96FT9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
IFT43Q96FT9 Y_RNA.495-201ENST00000384435 112 ntBASIC3.4□□□□□ -1.87
IFT43Q96FT9 AC233266.1-201ENST00000454518 96 ntBASIC3.4□□□□□ -1.87
IFT43Q96FT9 HMGN1P18-201ENST00000457642 277 ntBASIC3.4□□□□□ -1.87
IFT43Q96FT9 NDUFA4P2-201ENST00000489989 244 ntBASIC3.4□□□□□ -1.87
IFT43Q96FT9 HMGN1P7-201ENST00000491722 313 ntBASIC3.4□□□□□ -1.87
IFT43Q96FT9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
IFT43Q96FT9 RNU6-412P-201ENST00000516434 106 ntBASIC3.4□□□□□ -1.87
IFT43Q96FT9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.4□□□□□ -1.87
IFT43Q96FT9 AC242852.1-201ENST00000612151 96 ntBASIC3.4□□□□□ -1.87
IFT43Q96FT9 MIR8057-201ENST00000620957 69 ntBASIC3.4□□□□□ -1.87
IFT43Q96FT9 AC244015.1-201ENST00000622301 99 ntBASIC3.4□□□□□ -1.87
IFT43Q96FT9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
IFT43Q96FT9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
IFT43Q96FT9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.4□□□□□ -1.87
IFT43Q96FT9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
IFT43Q96FT9 RPS29P24-201ENST00000486345 171 ntBASIC3.39□□□□□ -1.87
IFT43Q96FT9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.39□□□□□ -1.87
IFT43Q96FT9 MIR3129-201ENST00000581095 76 ntBASIC3.39□□□□□ -1.87
IFT43Q96FT9 AC005000.2-201ENST00000605468 310 ntBASIC3.39□□□□□ -1.87
IFT43Q96FT9 AC093010.3-201ENST00000570269 15214 ntBASIC3.39□□□□□ -1.87
IFT43Q96FT9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.39□□□□□ -1.87
IFT43Q96FT9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.39□□□□□ -1.87
IFT43Q96FT9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
IFT43Q96FT9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
IFT43Q96FT9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.38□□□□□ -1.87
IFT43Q96FT9 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 Y_RNA.116-201ENST00000363292 103 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 Y_RNA.242-201ENST00000364473 110 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 RPL21P3-201ENST00000395517 478 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 Z92545.1-201ENST00000411782 234 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 RNU6-113P-201ENST00000516653 101 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 RNU6-667P-201ENST00000517186 102 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 RNU7-128P-201ENST00000517247 62 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
IFT43Q96FT9 MIR4276-201ENST00000584832 70 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 AL359075.3-201ENST00000613288 217 ntBASIC3.38□□□□□ -1.87
IFT43Q96FT9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
IFT43Q96FT9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
IFT43Q96FT9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
IFT43Q96FT9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms