Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
HMGB4Q8WW32 AC008555.8-201ENST00000623602 2168 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 RNU6-117P-201ENST00000365415 107 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.376-201ENST00000365638 108 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HMGB4Q8WW32 RNA5SP323-201ENST00000391094 133 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 AL512604.1-201ENST00000404812 257 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 RNA5SP100-201ENST00000410903 110 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 RNA5SP59-201ENST00000410922 110 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 AL158823.1-201ENST00000418441 478 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.06□□□□□ -2.08
HMGB4Q8WW32 MTND3P2-201ENST00000438452 342 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 HSPE1P13-201ENST00000451143 297 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 RNU7-172P-201ENST00000517125 64 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 MIR3145-201ENST00000580727 82 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 MIR6840-201ENST00000611937 71 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.06□□□□□ -2.08
HMGB4Q8WW32 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
HMGB4Q8WW32 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.06□□□□□ -2.08
HMGB4Q8WW32 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.136-201ENST00000363444 102 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.418-201ENST00000384029 102 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 SNORA8-201ENST00000384574 139 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.569-201ENST00000384749 103 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 MIR568-201ENST00000385036 95 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 SNORA40.18-201ENST00000391200 128 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 RNU6-1203P-201ENST00000410703 110 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 AL139156.1-201ENST00000412785 841 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 CYCSP49-201ENST00000420810 319 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 AC010154.1-201ENST00000425857 269 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.05□□□□□ -2.08
HMGB4Q8WW32 HMGN1P10-201ENST00000474557 553 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 AC010409.1-201ENST00000487382 476 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 AL163195.1-201ENST00000496941 348 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 RNU6-1337P-201ENST00000516525 95 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 RNU6-570P-201ENST00000517051 105 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 AL161670.1-201ENST00000554348 137 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 AL162730.1-201ENST00000605734 292 ntBASIC2.05□□□□□ -2.08
HMGB4Q8WW32 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
HMGB4Q8WW32 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
HMGB4Q8WW32 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
HMGB4Q8WW32 RNU6-112P-201ENST00000363599 104 ntBASIC2.04□□□□□ -2.08
HMGB4Q8WW32 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
HMGB4Q8WW32 snosnR66.1-201ENST00000391095 99 ntBASIC2.04□□□□□ -2.08
HMGB4Q8WW32 RNU6-710P-201ENST00000410424 105 ntBASIC2.04□□□□□ -2.08
HMGB4Q8WW32 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.04□□□□□ -2.08
HMGB4Q8WW32 AL445685.2-201ENST00000422551 342 ntBASIC2.04□□□□□ -2.08
HMGB4Q8WW32 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGB4Q8WW32 AC073413.2-201ENST00000604332 360 ntBASIC2.04□□□□□ -2.08
HMGB4Q8WW32 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.04□□□□□ -2.08
HMGB4Q8WW32 MIRLET7G-201ENST00000362280 84 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 Y_RNA.16-201ENST00000362421 102 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 RNU1-17P-201ENST00000363022 152 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 SNORA63D-201ENST00000364359 132 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 RNU6-472P-201ENST00000384299 107 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 RNU6-296P-201ENST00000384608 107 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 MIR17-201ENST00000385012 84 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGB4Q8WW32 TRBVB-201ENST00000477100 408 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 RPL23AP63-201ENST00000498752 471 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 RNU6-1278P-201ENST00000516130 107 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 RNU6-63P-201ENST00000516690 95 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
HMGB4Q8WW32 AC110588.1-201ENST00000559699 137 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 AL773524.1-201ENST00000614065 229 ntBASIC2.03□□□□□ -2.08
HMGB4Q8WW32 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
HMGB4Q8WW32 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGB4Q8WW32 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
HMGB4Q8WW32 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HMGB4Q8WW32 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 RNU4-80P-201ENST00000363200 141 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.172-201ENST00000363765 102 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.338-201ENST00000365320 114 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 RNU6-326P-201ENST00000365480 107 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.02□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.461-201ENST00000384263 103 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 SNORD116-13-201ENST00000384408 92 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 MT-TW-201ENST00000387382 68 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 RNA5SP212-201ENST00000391223 107 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 MIR1302-6-201ENST00000408466 90 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 AC009310.1-201ENST00000414414 451 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 AC024067.1-201ENST00000426199 223 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 MTCO1P5-201ENST00000433573 344 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 AC069257.2-201ENST00000441819 155 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGB4Q8WW32 RNU6-1338P-201ENST00000516328 91 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.676-201ENST00000516393 96 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 RNU2-31P-201ENST00000516954 155 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.02□□□□□ -2.09
HMGB4Q8WW32 AC010900.2-201ENST00000604508 210 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 AP001282.2-201ENST00000616149 309 ntBASIC2.02□□□□□ -2.09
HMGB4Q8WW32 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.396-201ENST00000383949 103 ntBASIC2.01□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.483-201ENST00000384380 101 ntBASIC2.01□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.518-201ENST00000384552 113 ntBASIC2.01□□□□□ -2.09
HMGB4Q8WW32 MIR520A-201ENST00000384862 85 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 391 ms