Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RPL23AP83-201ENST00000434984 473 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 RPS15AP28-201ENST00000435088 386 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 CST9LP2-201ENST00000437612 320 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.34□□□□□ -1.87
NFKB1P19838 Y_RNA.666-201ENST00000516187 112 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 RNU7-99P-201ENST00000516271 62 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 RNU6-1146P-201ENST00000516282 102 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 RNU6-844P-201ENST00000517175 102 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 AC087685.1-201ENST00000587507 141 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 AL161756.2-201ENST00000604597 246 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 AL137067.1-201ENST00000615933 120 ntBASIC3.34□□□□□ -1.87
NFKB1P19838 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.34□□□□□ -1.88
NFKB1P19838 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NFKB1P19838 RNU6-640P-201ENST00000363693 105 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 Y_RNA.242-201ENST00000364473 110 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 Y_RNA.366-201ENST00000365540 102 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 Y_RNA.549-201ENST00000384657 102 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 SNORD77.3-201ENST00000391113 65 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 AC244505.4-201ENST00000434905 287 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 SSXP5-201ENST00000443473 287 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 CYCSP35-201ENST00000451978 304 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 RNU6-991P-201ENST00000516168 107 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 RN7SKP282-201ENST00000516824 299 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 SCARNA20.6-201ENST00000517251 106 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 MIR3199-1-201ENST00000582434 88 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.33□□□□□ -1.88
NFKB1P19838 AC007229.1-201ENST00000590455 412 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 MIR5739-201ENST00000619803 80 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 AC018630.2-201ENST00000534866 2403 ntBASIC3.33□□□□□ -1.88
NFKB1P19838 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.33□□□□□ -1.88
NFKB1P19838 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NFKB1P19838 Z83843.1-201ENST00000604070 3685 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 RNA5SP119-201ENST00000362715 117 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 snoU2-30.2-201ENST00000362805 70 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 RNU1-23P-201ENST00000363361 144 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 RNU6-756P-201ENST00000383997 107 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 FO393413.1-201ENST00000402892 195 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 AL161788.1-201ENST00000441805 169 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 SNRPGP13-201ENST00000442212 177 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 AC233266.1-201ENST00000454518 96 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.32□□□□□ -1.88
NFKB1P19838 RNU6-693P-201ENST00000516134 107 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 RNU6-1291P-201ENST00000516591 104 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 AC068657.1-201ENST00000520807 306 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 AC104027.1-201ENST00000521887 300 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 MIR4444-1-201ENST00000581696 74 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 MIR4444-2-201ENST00000584390 74 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 AC242852.1-201ENST00000612151 96 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 AC244015.1-201ENST00000622301 99 ntBASIC3.32□□□□□ -1.88
NFKB1P19838 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.32□□□□□ -1.88
NFKB1P19838 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NFKB1P19838 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NFKB1P19838 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 MIR183-201ENST00000384958 110 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 MIR449B-201ENST00000384995 97 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 SNORA48.8-201ENST00000391324 134 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.31□□□□□ -1.88
NFKB1P19838 AC115115.1-201ENST00000449927 248 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 AC011406.1-201ENST00000512440 370 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 SNORD59.2-201ENST00000516873 68 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 MIR3944-201ENST00000581277 108 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 MIR5197-201ENST00000583721 112 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NFKB1P19838 MIR7515-201ENST00000637837 67 ntBASIC3.31□□□□□ -1.88
NFKB1P19838 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NFKB1P19838 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NFKB1P19838 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.3□□□□□ -1.88
NFKB1P19838 RNA5SP139-201ENST00000364340 117 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 MIR518F-201ENST00000384973 87 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 MIR1302-5-201ENST00000408164 150 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 CYP2C59P-201ENST00000457790 269 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 SCGB1D5P-201ENST00000515134 247 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 RNU1-143P-201ENST00000516296 146 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 SNORA64.4-201ENST00000516632 81 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 RNU6-341P-201ENST00000516973 96 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 SNORA48.11-201ENST00000517015 89 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.3□□□□□ -1.88
NFKB1P19838 AL358944.1-201ENST00000528537 144 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 U1.23-201ENST00000610293 146 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 RNU1-68P-201ENST00000615382 146 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 AP001318.4-201ENST00000616637 121 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 MIR6075-201ENST00000620782 95 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 U1.39-201ENST00000621562 146 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 AL035470.1-201ENST00000622571 220 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 AC073476.4-201ENST00000628409 72 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 MIR6079-201ENST00000635807 62 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 U6.105-201ENST00000637379 88 ntBASIC3.3□□□□□ -1.88
NFKB1P19838 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
NFKB1P19838 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NFKB1P19838 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
NFKB1P19838 SNORD56.3-201ENST00000363507 71 ntBASIC3.29□□□□□ -1.88
NFKB1P19838 SNORA51.5-201ENST00000384126 131 ntBASIC3.29□□□□□ -1.88
NFKB1P19838 RNU2-48P-201ENST00000410694 191 ntBASIC3.29□□□□□ -1.88
NFKB1P19838 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.29□□□□□ -1.88
NFKB1P19838 HMGN2P32-201ENST00000444648 269 ntBASIC3.29□□□□□ -1.88
NFKB1P19838 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.29□□□□□ -1.88
NFKB1P19838 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms