Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU6-1235P-201ENST00000384559 107 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 RNU6-160P-201ENST00000384591 107 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 Y_RNA.570-201ENST00000384750 101 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 AC060773.1-201ENST00000421698 310 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.43□□□□□ -2.18
HDAC3O15379 AC245102.2-201ENST00000448956 180 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 HMGN2P23-201ENST00000456759 269 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 RNU6-498P-201ENST00000459468 107 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.43□□□□□ -2.18
HDAC3O15379 AP005660.1-201ENST00000522972 293 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 AP003733.2-201ENST00000529409 171 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.43□□□□□ -2.18
HDAC3O15379 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.43□□□□□ -2.18
HDAC3O15379 MIR4524B-201ENST00000581569 115 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 MIR3124-201ENST00000582636 67 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 AC006001.4-201ENST00000622243 395 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 snoZ196.1-201ENST00000625269 89 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 MIR3674-201ENST00000636576 68 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
HDAC3O15379 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.43□□□□□ -2.18
HDAC3O15379 MIR410-201ENST00000362222 80 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 RNU1-58P-201ENST00000362413 163 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 Y_RNA.16-201ENST00000362421 102 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 SNORD81.1-201ENST00000363064 77 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 RNU6-23P-201ENST00000363283 107 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 Y_RNA.144-201ENST00000363521 113 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 Y_RNA.176-201ENST00000363815 109 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 Y_RNA.483-201ENST00000384380 101 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 MIR1323-201ENST00000408090 73 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 MIR1185-2-201ENST00000408687 86 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 Y_RNA.602-201ENST00000410535 92 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 AL731563.1-201ENST00000442202 214 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 NDUFB4P10-201ENST00000452541 359 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.42□□□□□ -2.18
HDAC3O15379 RNU6-221P-201ENST00000459541 99 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 SNORA25.15-201ENST00000516487 89 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 RNU6-570P-201ENST00000517051 105 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 AC025647.1-201ENST00000517879 253 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.42□□□□□ -2.18
HDAC3O15379 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.42□□□□□ -2.18
HDAC3O15379 AL161670.1-201ENST00000554348 137 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 AL160236.1-201ENST00000556317 195 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 AC015712.3-201ENST00000559380 164 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 AC005176.2-201ENST00000596933 147 ntBASIC1.42□□□□□ -2.18
HDAC3O15379 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.42□□□□□ -2.18
HDAC3O15379 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HDAC3O15379 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.41□□□□□ -2.18
HDAC3O15379 SNORD113-8-201ENST00000363497 74 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 Y_RNA.149-201ENST00000363558 117 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 Y_RNA.152-201ENST00000363578 100 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 Y_RNA.376-201ENST00000365638 108 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 Y_RNA.446-201ENST00000384178 104 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 RNU6-505P-201ENST00000384427 107 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 Y_RNA.541-201ENST00000384640 113 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 AL117342.1-201ENST00000404861 406 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 TOMM22P2-201ENST00000430735 237 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 AC099677.2-201ENST00000436385 175 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 HSPE1P25-201ENST00000455484 251 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 RNU1-131P-201ENST00000458943 161 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 AC114982.1-201ENST00000469402 321 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.41□□□□□ -2.18
HDAC3O15379 RNU6-496P-201ENST00000516145 99 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 Y_RNA.713-201ENST00000517013 96 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 RNU2-12P-201ENST00000517216 168 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 CYCSP23-201ENST00000519781 313 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.41□□□□□ -2.18
HDAC3O15379 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 MIR8062-201ENST00000621515 85 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.41□□□□□ -2.18
HDAC3O15379 AL159152.1-201ENST00000635019 2587 ntBASIC1.41□□□□□ -2.18
HDAC3O15379 Y_RNA.84-201ENST00000363011 104 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 Y_RNA.193-201ENST00000363979 102 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 SNORD63-201ENST00000384262 68 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 HMGN2P34-201ENST00000437647 269 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 RNU6-1041P-201ENST00000516254 102 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 RNU6-948P-201ENST00000516374 107 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 RNU2-34P-201ENST00000516534 121 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 RNU7-110P-201ENST00000516891 62 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 MIR3683-201ENST00000580847 82 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 AC022441.3-201ENST00000605737 136 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.4□□□□□ -2.19
HDAC3O15379 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
HDAC3O15379 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
HDAC3O15379 MIR424-201ENST00000362227 98 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNU1-17P-201ENST00000363022 152 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNA5SP99-201ENST00000364020 114 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 Y_RNA.230-201ENST00000364348 109 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 Y_RNA.287-201ENST00000364853 94 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNA5SP190-201ENST00000365222 118 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 Y_RNA.331-201ENST00000365267 102 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 Y_RNA.461-201ENST00000384263 103 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 Y_RNA.462-201ENST00000384268 102 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNU6-196P-201ENST00000384315 107 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNU6-463P-201ENST00000384340 107 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HDAC3O15379 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HDAC3O15379 Y_RNA.581-201ENST00000391017 97 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms