Protein–RNA interactions for Protein: Q9Y496

KIF3A, Kinesin-like protein KIF3A, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3AQ9Y496 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
KIF3AQ9Y496 AC073544.1-201ENST00000600110 1595 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 SNORA27.1-201ENST00000362604 124 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 RNU6-969P-201ENST00000383900 105 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 Y_RNA.402-201ENST00000383972 102 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 Y_RNA.554-201ENST00000384672 102 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 MIR329-1-201ENST00000385028 80 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 RNU6-373P-201ENST00000411247 98 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 MTND2P22-201ENST00000444325 1033 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 RPL39P39-201ENST00000455840 151 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 RNU6-566P-201ENST00000516790 107 ntBASIC0.91□□□□□ -2.26
KIF3AQ9Y496 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.91□□□□□ -2.26
KIF3AQ9Y496 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.9□□□□□ -2.26
KIF3AQ9Y496 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
KIF3AQ9Y496 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
KIF3AQ9Y496 MIRLET7C-201ENST00000362160 84 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 RNA5SP361-201ENST00000362686 118 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 RNU6-1264P-201ENST00000383891 107 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 RNU6-136P-201ENST00000384663 107 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 SNORD12-201ENST00000391002 90 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 EIF1P2-201ENST00000428233 350 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 AC233266.1-201ENST00000454518 96 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 RNU7-87P-201ENST00000459343 62 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 AP002004.2-201ENST00000531656 154 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 AC090617.3-201ENST00000573670 475 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 AC068790.6-201ENST00000602558 258 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 AC108706.1-201ENST00000611053 297 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 AC242852.1-201ENST00000612151 96 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 AC244015.1-201ENST00000622301 99 ntBASIC0.9□□□□□ -2.27
KIF3AQ9Y496 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
KIF3AQ9Y496 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
KIF3AQ9Y496 Y_RNA.490-201ENST00000384413 102 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 SNORA80D-201ENST00000384488 135 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 RNU2-64P-201ENST00000411315 191 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 MTND4LP16-201ENST00000440828 295 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.89□□□□□ -2.27
KIF3AQ9Y496 MTND1P17-201ENST00000448961 204 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 RNU6-197P-201ENST00000516680 100 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 RNU7-28P-201ENST00000516759 62 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 AC090142.3-201ENST00000519012 385 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.89□□□□□ -2.27
KIF3AQ9Y496 AL357312.1-201ENST00000603879 298 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 AC048344.4-201ENST00000619744 527 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 MIR3662-201ENST00000637030 95 ntBASIC0.89□□□□□ -2.27
KIF3AQ9Y496 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
KIF3AQ9Y496 Y_RNA.116-201ENST00000363292 103 ntBASIC0.88□□□□□ -2.27
KIF3AQ9Y496 MIR526A1-201ENST00000384897 85 ntBASIC0.88□□□□□ -2.27
KIF3AQ9Y496 MIR190B-201ENST00000401119 79 ntBASIC0.88□□□□□ -2.27
KIF3AQ9Y496 MTCYBP4-201ENST00000401524 249 ntBASIC0.88□□□□□ -2.27
KIF3AQ9Y496 AC009161.1-201ENST00000417306 376 ntBASIC0.88□□□□□ -2.27
KIF3AQ9Y496 PCNPP5-201ENST00000452246 481 ntBASIC0.88□□□□□ -2.27
KIF3AQ9Y496 Y_RNA.673-201ENST00000516306 88 ntBASIC0.88□□□□□ -2.27
KIF3AQ9Y496 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
KIF3AQ9Y496 AL096861.1-201ENST00000610899 123 ntBASIC0.88□□□□□ -2.27
KIF3AQ9Y496 RNU6-874P-201ENST00000362390 105 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 Y_RNA.89-201ENST00000363031 102 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 RNU6-879P-201ENST00000364328 108 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
KIF3AQ9Y496 MIR605-201ENST00000385078 83 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 SNORA75.2-201ENST00000391138 150 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 SNORA75.3-201ENST00000391231 150 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 RNA5SP482-201ENST00000391269 118 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 MIR942-201ENST00000401111 86 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 AC004941.2-201ENST00000427009 228 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 Z98949.2-201ENST00000440996 144 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 AL137792.2-201ENST00000443484 235 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 RPS4XP11-201ENST00000446897 772 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 SNORD5.1-201ENST00000458800 75 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 snoU13.25-201ENST00000458945 104 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 U8.22-201ENST00000459141 133 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.87□□□□□ -2.27
KIF3AQ9Y496 RNU6-63P-201ENST00000516690 95 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 MIR4790-201ENST00000577799 79 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 AC005014.2-201ENST00000607795 599 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 AC106800.4-201ENST00000614905 153 ntBASIC0.87□□□□□ -2.27
KIF3AQ9Y496 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.87□□□□□ -2.27
KIF3AQ9Y496 RNY4P14-201ENST00000363656 96 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 RNU4-41P-201ENST00000364426 143 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 RNU6-1013P-201ENST00000384180 107 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 RNU6-1145P-201ENST00000384246 107 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 MIR181A1-201ENST00000385026 110 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 MIR100-201ENST00000385259 80 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
KIF3AQ9Y496 MIR548J-201ENST00000408833 112 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 AC006461.1-201ENST00000412637 326 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 AL606490.4-201ENST00000423117 127 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 MTND3P21-201ENST00000433774 331 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 LINC01399-202ENST00000458450 244 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 AL049830.1-201ENST00000468034 425 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.86□□□□□ -2.27
KIF3AQ9Y496 MIR5701-3-201ENST00000578890 82 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 MIR5701-1-201ENST00000585138 82 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.86□□□□□ -2.27
KIF3AQ9Y496 AL078603.1-201ENST00000603824 313 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 AC012557.2-201ENST00000605919 418 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 MIR5701-2-201ENST00000615634 82 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 AC104260.1-201ENST00000616660 539 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 AC127459.3-201ENST00000624328 466 ntBASIC0.86□□□□□ -2.27
KIF3AQ9Y496 U6.115-201ENST00000636045 103 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms