Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU6-948P-201ENST00000516374 107 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 AC010900.2-201ENST00000604508 210 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 AC127459.3-201ENST00000624328 466 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 U6.115-201ENST00000636045 103 ntBASIC2.01□□□□□ -2.09
SMARCAL1Q9NZC9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 SNORD115-30-201ENST00000364117 82 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 SNORD114-6-201ENST00000364393 72 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.329-201ENST00000365209 107 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.418-201ENST00000384029 102 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.447-201ENST00000384184 113 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 SNORA70B-201ENST00000384210 135 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 RNU6-1235P-201ENST00000384559 107 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 MIR1261-201ENST00000408659 82 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 SRIP3-201ENST00000413200 219 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 AC074290.1-201ENST00000448883 135 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 RNU6-498P-201ENST00000459468 107 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 RNU6-436P-201ENST00000516171 114 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 RNU6-1271P-201ENST00000517049 105 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 AC027419.1-201ENST00000522976 328 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 MIR3128-201ENST00000581957 66 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 DEFB117-201ENST00000602356 141 ntBASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
SMARCAL1Q9NZC9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 AC245060.5-201ENST00000610778 3293 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.188-201ENST00000363952 111 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.243-201ENST00000364481 109 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.350-201ENST00000365409 98 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.518-201ENST00000384552 113 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 AL355796.1-201ENST00000406706 323 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 AC016909.1-201ENST00000415916 166 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 AL445646.1-201ENST00000431784 216 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 SERF1AP1-201ENST00000514575 187 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.673-201ENST00000516306 88 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 RNU2-31P-201ENST00000516954 155 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 AC025647.1-201ENST00000517879 253 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 RPL21P9-201ENST00000556149 474 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SMARCAL1Q9NZC9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 MIR335-201ENST00000362173 94 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 RNU4-80P-201ENST00000363200 141 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.562-201ENST00000384695 113 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 SNORA53-201ENST00000391141 249 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 AL031003.1-201ENST00000404229 172 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 MTCO1P5-201ENST00000433573 344 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 SNORD65B-201ENST00000459126 73 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 RPL39P38-201ENST00000467018 153 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 MIR4529-201ENST00000578110 78 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 MIR4287-201ENST00000579398 78 ntBASIC1.98□□□□□ -2.09
SMARCAL1Q9NZC9 CENPCP1-201ENST00000533085 2578 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.60-201ENST00000362831 98 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 RNU6-326P-201ENST00000365480 107 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 SNORA20B-201ENST00000384220 132 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.618-201ENST00000410949 107 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 AC060773.1-201ENST00000421698 310 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 AL121890.1-201ENST00000435457 205 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 AL357134.1-201ENST00000445848 426 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 MTND4LP30-201ENST00000454092 297 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 RPS29P21-201ENST00000496272 170 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 YWHAEP4-201ENST00000505390 198 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 AC087441.2-201ENST00000529141 262 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 MIR3126-201ENST00000577443 74 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.97□□□□□ -2.09
SMARCAL1Q9NZC9 Y_RNA.54-201ENST00000362766 105 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.99-201ENST00000363138 105 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 Y_RNA.124-201ENST00000363339 93 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-379P-201ENST00000363813 104 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 SNORD27-201ENST00000363981 72 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 AL603910.2-201ENST00000407268 136 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 EDDM3CP-201ENST00000415977 425 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 RNU2-34P-201ENST00000516534 121 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 RNU6-856P-201ENST00000516959 98 ntBASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.96□□□□□ -2.1
SMARCAL1Q9NZC9 MIR3671-201ENST00000580455 88 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms