Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 Y_RNA.594-201ENST00000410373 140 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 AC074085.1-201ENST00000413598 418 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.16□□□□□ -2.22
VMP1Q96GC9 AC018865.2-201ENST00000423631 129 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 RPS3AP52-201ENST00000435639 297 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.16□□□□□ -2.22
VMP1Q96GC9 PCNPP5-201ENST00000452246 481 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.16□□□□□ -2.22
VMP1Q96GC9 AC091178.2-201ENST00000584401 117 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 AL357312.1-201ENST00000603879 298 ntBASIC1.16□□□□□ -2.22
VMP1Q96GC9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
VMP1Q96GC9 Y_RNA.72-201ENST00000362894 103 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
VMP1Q96GC9 SNORA22-201ENST00000383907 134 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 SNORA22C-201ENST00000384614 134 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 SNORD41-201ENST00000386967 70 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 RNU6-1050P-201ENST00000410388 107 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 AC245047.7-201ENST00000440265 293 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 FGF7P6-202ENST00000451282 293 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 RPL39P39-201ENST00000455840 151 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.15□□□□□ -2.23
VMP1Q96GC9 RNU6-1278P-201ENST00000516130 107 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 Y_RNA.670-201ENST00000516255 105 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 RNU6-917P-201ENST00000516294 104 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 AC090821.2-201ENST00000523552 176 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 AC011712.1-201ENST00000588959 234 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 AC005014.2-201ENST00000607795 599 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 AC084782.3-201ENST00000612282 578 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 AC005592.1-201ENST00000566527 1640 ntBASIC1.15□□□□□ -2.23
VMP1Q96GC9 MIR337-201ENST00000362281 93 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 Y_RNA.2-201ENST00000362330 96 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 SNORA1B-201ENST00000362535 133 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 RNU6-879P-201ENST00000364328 108 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 RNU6-392P-201ENST00000364926 101 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 Y_RNA.339-201ENST00000365325 102 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 RNU6-601P-201ENST00000384540 107 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 SNORD12-201ENST00000391002 90 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 MTCYBP10-201ENST00000424905 650 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 AC107399.1-201ENST00000451226 265 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 AC093850.1-201ENST00000454121 251 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 AC022493.2-201ENST00000506122 481 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 RN7SKP49-201ENST00000516675 260 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 AC018448.1-201ENST00000552843 316 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 AC080078.2-201ENST00000603766 501 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.14□□□□□ -2.23
VMP1Q96GC9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.13□□□□□ -2.23
VMP1Q96GC9 Y_RNA.557-201ENST00000384680 107 ntBASIC1.13□□□□□ -2.23
VMP1Q96GC9 RNA5SP475-201ENST00000410568 110 ntBASIC1.13□□□□□ -2.23
VMP1Q96GC9 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
VMP1Q96GC9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.13□□□□□ -2.23
VMP1Q96GC9 Y_RNA.708-201ENST00000516950 96 ntBASIC1.13□□□□□ -2.23
VMP1Q96GC9 AC105029.1-201ENST00000520250 669 ntBASIC1.13□□□□□ -2.23
VMP1Q96GC9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.13□□□□□ -2.23
VMP1Q96GC9 AC136932.1-201ENST00000574771 208 ntBASIC1.13□□□□□ -2.23
VMP1Q96GC9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.13□□□□□ -2.23
VMP1Q96GC9 MIR4661-201ENST00000582720 75 ntBASIC1.13□□□□□ -2.23
VMP1Q96GC9 AL357075.2-201ENST00000614906 189 ntBASIC1.13□□□□□ -2.23
VMP1Q96GC9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.12□□□□□ -2.23
VMP1Q96GC9 RNY1P16-201ENST00000363063 111 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 Y_RNA.482-201ENST00000384377 111 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 AC063976.4-201ENST00000421971 163 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 AL353997.1-201ENST00000432936 108 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 AL137792.2-201ENST00000443484 235 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.12□□□□□ -2.23
VMP1Q96GC9 AL049830.1-201ENST00000468034 425 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 RNU6-1291P-201ENST00000516591 104 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.12□□□□□ -2.23
VMP1Q96GC9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.12□□□□□ -2.23
VMP1Q96GC9 AC009229.3-201ENST00000608056 282 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 AC127459.3-201ENST00000624328 466 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 U6.115-201ENST00000636045 103 ntBASIC1.12□□□□□ -2.23
VMP1Q96GC9 MIR410-201ENST00000362222 80 ntBASIC1.11□□□□□ -2.23
VMP1Q96GC9 RNU6-874P-201ENST00000362390 105 ntBASIC1.11□□□□□ -2.23
VMP1Q96GC9 Y_RNA.88-201ENST00000363029 99 ntBASIC1.11□□□□□ -2.23
VMP1Q96GC9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
VMP1Q96GC9 AC002429.1-201ENST00000437672 148 ntBASIC1.11□□□□□ -2.23
VMP1Q96GC9 MTND3P10-201ENST00000450967 341 ntBASIC1.11□□□□□ -2.23
VMP1Q96GC9 RPL7P42-201ENST00000481005 679 ntBASIC1.11□□□□□ -2.23
VMP1Q96GC9 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
VMP1Q96GC9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.11□□□□□ -2.23
VMP1Q96GC9 AC098679.4-201ENST00000624241 654 ntBASIC1.11□□□□□ -2.23
VMP1Q96GC9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
VMP1Q96GC9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
VMP1Q96GC9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
VMP1Q96GC9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 RNA5SP361-201ENST00000362686 118 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.1□□□□□ -2.23
VMP1Q96GC9 RNU6-767P-201ENST00000384132 107 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 MIR520G-201ENST00000385064 90 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 MIR873-201ENST00000401120 77 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 POLR2J4-204ENST00000418424 324 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.1□□□□□ -2.23
VMP1Q96GC9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
VMP1Q96GC9 SUMO1P2-201ENST00000452524 304 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 AC233266.1-201ENST00000454518 96 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms