Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
NKX6-1P78426 RNU1-22P-201ENST00000363334 158 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 Y_RNA.277-201ENST00000364754 102 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 RNU6-662P-201ENST00000384253 104 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 RNA5SP148-201ENST00000516527 94 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 AC024995.1-201ENST00000523014 93 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 MIR3671-201ENST00000580455 88 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 AC078899.2-201ENST00000595282 212 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
NKX6-1P78426 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX6-1P78426 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX6-1P78426 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NKX6-1P78426 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
NKX6-1P78426 AL356292.1-201ENST00000283110 373 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 Y_RNA.60-201ENST00000362831 98 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 RNU6-376P-201ENST00000384731 106 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 MIR518C-201ENST00000384822 101 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 RNA5SP467-201ENST00000391274 118 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 AL117342.1-201ENST00000404861 406 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 EBAG9P1-201ENST00000418955 543 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-1P78426 RNU7-99P-201ENST00000516271 62 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 SNORA9.3-201ENST00000516383 129 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 RNU7-193P-201ENST00000516723 65 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 MIR4769-201ENST00000584126 77 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.34□□□□□ -2.03
NKX6-1P78426 AC010297.1-201ENST00000623948 149 ntBASIC2.34□□□□□ -2.03
NKX6-1P78426 ZNF271P-202ENST00000465539 1970 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 RNU6-379P-201ENST00000363813 104 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 RNU4-13P-201ENST00000364019 141 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 RNU6-740P-201ENST00000364734 105 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 SNORA67.1-201ENST00000364749 141 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 Y_RNA.310-201ENST00000365063 113 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 RNU6-1289P-201ENST00000384431 106 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 MIR597-201ENST00000384968 97 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 MIR1283-2-201ENST00000408621 87 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 Y_RNA.590-201ENST00000410140 107 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 HSPE1P21-201ENST00000438283 308 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.33□□□□□ -2.04
NKX6-1P78426 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.33□□□□□ -2.04
NKX6-1P78426 RPL36AP21-201ENST00000490372 323 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.33□□□□□ -2.04
NKX6-1P78426 Y_RNA.679-201ENST00000516416 91 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 Y_RNA.680-201ENST00000516441 93 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 SNORA31.25-201ENST00000517242 134 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
NKX6-1P78426 AC010900.2-201ENST00000604508 210 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.33□□□□□ -2.04
NKX6-1P78426 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
NKX6-1P78426 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
NKX6-1P78426 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
NKX6-1P78426 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
NKX6-1P78426 Y_RNA.65-201ENST00000362846 100 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 SNORA25.6-201ENST00000364121 118 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 RNU1-51P-201ENST00000365345 176 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 SNORA8-201ENST00000384574 139 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.32□□□□□ -2.04
NKX6-1P78426 RPS20P10-201ENST00000451209 253 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX6-1P78426 MTND1P19-201ENST00000511780 315 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
NKX6-1P78426 MIR4446-201ENST00000578505 67 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 AC005972.2-201ENST00000604690 348 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 AC069114.2-201ENST00000604699 304 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 AL078604.3-201ENST00000615580 211 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 U1.36-201ENST00000620684 176 ntBASIC2.32□□□□□ -2.04
NKX6-1P78426 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
NKX6-1P78426 Y_RNA.217-201ENST00000364214 105 ntBASIC2.31□□□□□ -2.04
NKX6-1P78426 Y_RNA.552-201ENST00000384665 112 ntBASIC2.31□□□□□ -2.04
NKX6-1P78426 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NKX6-1P78426 RNU6-847P-201ENST00000411115 108 ntBASIC2.31□□□□□ -2.04
NKX6-1P78426 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX6-1P78426 Y_RNA.641-201ENST00000459414 105 ntBASIC2.31□□□□□ -2.04
NKX6-1P78426 RNU6-63P-201ENST00000516690 95 ntBASIC2.31□□□□□ -2.04
NKX6-1P78426 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.31□□□□□ -2.04
NKX6-1P78426 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.31□□□□□ -2.04
NKX6-1P78426 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX6-1P78426 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NKX6-1P78426 RNU6-1272P-201ENST00000362776 107 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.82-201ENST00000363000 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.92-201ENST00000363043 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.117-201ENST00000363294 101 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 RNU6-801P-201ENST00000364087 105 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.235-201ENST00000364412 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.306-201ENST00000365015 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.312-201ENST00000365089 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.322-201ENST00000365151 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 RNU6-117P-201ENST00000365415 107 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 SNORA72.4-201ENST00000384174 132 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.515-201ENST00000384535 112 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 BTF3P11-201ENST00000426582 477 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 AC099677.2-201ENST00000436385 175 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.650-201ENST00000459002 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 snoU13.15-201ENST00000459407 104 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 RNU7-94P-201ENST00000459576 63 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 RNU7-116P-201ENST00000516940 62 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 Y_RNA.777-201ENST00000516982 102 ntBASIC2.3□□□□□ -2.04
NKX6-1P78426 MIR5094-201ENST00000578766 85 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms