Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC103810.1-201ENST00000579873 453 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC069294.1-201ENST00000608397 350 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC091895.1-201ENST00000624494 256 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 Z82195.2-201ENST00000612348 18351 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 RNU6-275P-201ENST00000364910 107 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 SNORD50B-201ENST00000364995 70 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 RNU4-17P-201ENST00000365598 141 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 SNORA18.2-201ENST00000383865 132 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MIR627-201ENST00000384979 97 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AL031003.1-201ENST00000404229 172 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MIR1289-2-201ENST00000408360 111 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 RNA5SP475-201ENST00000410568 110 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 CYCSP48-201ENST00000417124 323 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MTND4LP9-201ENST00000427694 174 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC010099.1-201ENST00000455434 375 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 CYCSP23-201ENST00000519781 313 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC136628.3-201ENST00000521868 290 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC022616.8-201ENST00000533569 253 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 NACAP3-201ENST00000552100 481 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MIR5089-201ENST00000580047 84 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MIR5194-201ENST00000582634 120 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AL034555.1-201ENST00000604816 211 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MTND1P7-201ENST00000632801 297 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.34□□□□□ -2.04
SNHG28P0DPA3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.121-201ENST00000363309 113 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 SNORA1.3-201ENST00000384676 136 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 MIR626-201ENST00000385032 94 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 MT-TT-201ENST00000387460 66 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 RNU6-578P-201ENST00000390980 103 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 RNU6-239P-201ENST00000390990 99 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 SNORA12-201ENST00000391162 147 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AC004386.2-201ENST00000441858 148 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AC114982.1-201ENST00000469402 321 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 RNU6-1234P-201ENST00000516877 103 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 RNU6-971P-201ENST00000516920 106 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 MIR3923-201ENST00000579521 83 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AC013791.1-201ENST00000616619 62 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AC010329.5-201ENST00000623497 2174 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU6-324P-201ENST00000363957 106 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU4-11P-201ENST00000365287 132 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.343-201ENST00000365354 112 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 SNORA72.4-201ENST00000384174 132 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 U8.13-201ENST00000390842 128 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU7-197P-201ENST00000458836 62 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU6-313P-201ENST00000516317 112 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU6-107P-201ENST00000516643 102 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 MIR3609-201ENST00000582661 80 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RPS15AP11-201ENST00000594193 385 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AL391813.1-201ENST00000603098 260 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AL078604.3-201ENST00000615580 211 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AC073308.1-201ENST00000623696 305 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 MIR3199-2-201ENST00000636243 86 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AC010332.2-201ENST00000613083 1904 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 ZNF702P-202ENST00000434269 1966 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AL391516.1-201ENST00000554380 2449 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 AC002543.1-201ENST00000299783 1954 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.542-201ENST00000384641 111 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 MIR548B-201ENST00000385247 97 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 snoU13.14-201ENST00000459372 104 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 AC145146.1-201ENST00000496370 254 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 SNORA25.12-201ENST00000516202 82 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 RNU1-117P-201ENST00000517041 158 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 MIR4744-201ENST00000581563 82 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 MIR3136-201ENST00000583498 78 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 U6.115-201ENST00000636045 103 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms