Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC103810.1-201ENST00000579873 453 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC069294.1-201ENST00000608397 350 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC091895.1-201ENST00000624494 256 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 Z82195.2-201ENST00000612348 18351 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 RNA5SP393-201ENST00000363423 117 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 RNU6-275P-201ENST00000364910 107 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 SNORD50B-201ENST00000364995 70 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 RNU4-17P-201ENST00000365598 141 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 SNORA18.2-201ENST00000383865 132 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MIR627-201ENST00000384979 97 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AL031003.1-201ENST00000404229 172 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MIR1289-2-201ENST00000408360 111 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 RNA5SP475-201ENST00000410568 110 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 CYCSP48-201ENST00000417124 323 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MTND4LP9-201ENST00000427694 174 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC010099.1-201ENST00000455434 375 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 CYCSP23-201ENST00000519781 313 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC136628.3-201ENST00000521868 290 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC022616.8-201ENST00000533569 253 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 NACAP3-201ENST00000552100 481 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MIR5089-201ENST00000580047 84 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MIR5194-201ENST00000582634 120 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AL034555.1-201ENST00000604816 211 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 MTND1P7-201ENST00000632801 297 ntBASIC2.34□□□□□ -2.03
SNHG28P0DPA3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.34□□□□□ -2.04
SNHG28P0DPA3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.121-201ENST00000363309 113 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 SNORA1.3-201ENST00000384676 136 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 MIR626-201ENST00000385032 94 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 MT-TT-201ENST00000387460 66 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 RNU6-578P-201ENST00000390980 103 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 RNU6-239P-201ENST00000390990 99 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 SNORA12-201ENST00000391162 147 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AC004386.2-201ENST00000441858 148 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AC114982.1-201ENST00000469402 321 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 RNU6-1234P-201ENST00000516877 103 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 RNU6-971P-201ENST00000516920 106 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 MIR3923-201ENST00000579521 83 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AC013791.1-201ENST00000616619 62 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AC010329.5-201ENST00000623497 2174 ntBASIC2.33□□□□□ -2.04
SNHG28P0DPA3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SNHG28P0DPA3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU6-324P-201ENST00000363957 106 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU4-11P-201ENST00000365287 132 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.343-201ENST00000365354 112 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 SNORA72.4-201ENST00000384174 132 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 U8.13-201ENST00000390842 128 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU7-197P-201ENST00000458836 62 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU6-313P-201ENST00000516317 112 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RNU6-107P-201ENST00000516643 102 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 MIR3609-201ENST00000582661 80 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 RPS15AP11-201ENST00000594193 385 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AL391813.1-201ENST00000603098 260 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AL078604.3-201ENST00000615580 211 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AC073308.1-201ENST00000623696 305 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 MIR3199-2-201ENST00000636243 86 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AC010332.2-201ENST00000613083 1904 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 ZNF702P-202ENST00000434269 1966 ntBASIC2.32□□□□□ -2.04
SNHG28P0DPA3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNHG28P0DPA3 AL391516.1-201ENST00000554380 2449 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 AC002543.1-201ENST00000299783 1954 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 Y_RNA.542-201ENST00000384641 111 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 MIR548B-201ENST00000385247 97 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 snoU13.14-201ENST00000459372 104 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 AC145146.1-201ENST00000496370 254 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 SNORA25.12-201ENST00000516202 82 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 RNU1-117P-201ENST00000517041 158 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.31□□□□□ -2.04
SNHG28P0DPA3 MIR4744-201ENST00000581563 82 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 MIR3136-201ENST00000583498 78 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.31□□□□□ -2.04
SNHG28P0DPA3 U6.115-201ENST00000636045 103 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms