Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC073910.1-201ENST00000445047 438 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 UQCRBP2-201ENST00000447827 297 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 LINC01399-202ENST00000458450 244 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 RNU6-625P-201ENST00000459412 107 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.47□□□□□ -2.17
HDAC3O15379 AC087441.2-201ENST00000529141 262 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.47□□□□□ -2.17
HDAC3O15379 AC018448.1-201ENST00000552843 316 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.47□□□□□ -2.17
HDAC3O15379 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HDAC3O15379 Y_RNA.19-201ENST00000362462 99 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 Y_RNA.101-201ENST00000363154 102 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU6-626P-201ENST00000363354 107 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU6-454P-201ENST00000364292 107 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU6-438P-201ENST00000365561 103 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU6-338P-201ENST00000383888 105 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU6-20P-201ENST00000384106 107 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 Y_RNA.439-201ENST00000384119 94 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU6-975P-201ENST00000384296 105 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU6-102P-201ENST00000384485 104 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU6-1109P-201ENST00000391187 107 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 MIR300-201ENST00000401138 83 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 AC009310.1-201ENST00000414414 451 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HDAC3O15379 RAB28P5-201ENST00000427490 651 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.46□□□□□ -2.18
HDAC3O15379 AC005002.2-201ENST00000438228 269 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
HDAC3O15379 RNY3P15-201ENST00000516297 97 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 RNU6-548P-201ENST00000517083 115 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 MIR3169-201ENST00000578032 83 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 MIR4753-201ENST00000585119 83 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.46□□□□□ -2.18
HDAC3O15379 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
HDAC3O15379 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
HDAC3O15379 LINC02555-201ENST00000563933 1951 ntBASIC1.46□□□□□ -2.18
HDAC3O15379 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
HDAC3O15379 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
HDAC3O15379 Y_RNA.47-201ENST00000362697 108 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 Y_RNA.183-201ENST00000363882 113 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 RNU6-770P-201ENST00000363929 105 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 Y_RNA.286-201ENST00000364813 102 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 SNORA63.7-201ENST00000365579 123 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 Y_RNA.574-201ENST00000384766 95 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 AL627390.1-201ENST00000396055 340 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 RNU4-30P-201ENST00000410245 143 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 RNU6-57P-201ENST00000411348 103 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.45□□□□□ -2.18
HDAC3O15379 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 snoU13.23-201ENST00000458863 104 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 RNA5SP57-201ENST00000459463 123 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 RNU6-107P-201ENST00000516643 102 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 RNU6-856P-201ENST00000516959 98 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.45□□□□□ -2.18
HDAC3O15379 MIR4423-201ENST00000580922 80 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 MIR4300-201ENST00000581016 96 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.45□□□□□ -2.18
HDAC3O15379 Y_RNA.772-201ENST00000606692 102 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 AC130454.1-201ENST00000622948 401 ntBASIC1.45□□□□□ -2.18
HDAC3O15379 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
HDAC3O15379 snoU2_19.2-201ENST00000363024 80 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 RNA5SP493-201ENST00000364115 91 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 Y_RNA.276-201ENST00000364732 109 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 Y_RNA.396-201ENST00000383949 103 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 Y_RNA.498-201ENST00000384460 102 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 MT-TW-201ENST00000387382 68 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 SNORD115-46-201ENST00000390982 71 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 RNU6-1199P-201ENST00000411249 104 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 MTCYBP9-201ENST00000431021 303 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 RNU7-57P-201ENST00000459540 60 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 AC108210.2-201ENST00000503681 201 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 AC025465.3-201ENST00000510570 311 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 MTCO2P24-201ENST00000515611 426 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 AC074133.1-201ENST00000515696 183 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 SNORA40.15-201ENST00000516884 107 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.44□□□□□ -2.18
HDAC3O15379 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.44□□□□□ -2.18
HDAC3O15379 MIR4503-201ENST00000582187 83 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 AC004467.1-201ENST00000615678 330 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 MIR376A1-201ENST00000616574 68 ntBASIC1.44□□□□□ -2.18
HDAC3O15379 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.44□□□□□ -2.18
HDAC3O15379 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HDAC3O15379 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HDAC3O15379 SNORA33-201ENST00000363664 130 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 U3.8-201ENST00000363675 217 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 RNU5F-3P-201ENST00000363767 117 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 RNU6-1175P-201ENST00000365200 107 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 RNU6-1264P-201ENST00000383891 107 ntBASIC1.43□□□□□ -2.18
HDAC3O15379 RNU6-472P-201ENST00000384299 107 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms