Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.85□□□□□ -2.11
LRRC53A6NM62 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.85□□□□□ -2.11
LRRC53A6NM62 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.85□□□□□ -2.11
LRRC53A6NM62 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LRRC53A6NM62 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
LRRC53A6NM62 RNU1-22P-201ENST00000363334 158 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 Y_RNA.361-201ENST00000365515 120 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 Y_RNA.462-201ENST00000384268 102 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
LRRC53A6NM62 RNA5SP109-201ENST00000391010 116 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 MIR873-201ENST00000401120 77 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 AL031003.1-201ENST00000404229 172 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.84□□□□□ -2.11
LRRC53A6NM62 HSPE1P9-201ENST00000440046 311 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 RPS26P45-201ENST00000471748 340 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 AC097462.1-201ENST00000514125 324 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 RNA5SP182-201ENST00000516064 82 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 RNU7-172P-201ENST00000517125 64 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.84□□□□□ -2.11
LRRC53A6NM62 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 RAC1P9-201ENST00000604990 392 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.84□□□□□ -2.11
LRRC53A6NM62 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.84□□□□□ -2.12
LRRC53A6NM62 RNU6-271P-201ENST00000363858 105 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 SNORA4.2-201ENST00000365313 147 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 SNORA63.7-201ENST00000365579 123 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 AC117470.1-201ENST00000381974 330 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 MIR1252-201ENST00000408861 65 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 RNU5A-5P-201ENST00000411054 116 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 AC069257.2-201ENST00000441819 155 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 RPS27P1-201ENST00000450552 247 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 Y_RNA.713-201ENST00000517013 96 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 AP003072.1-201ENST00000531740 145 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 AC073413.2-201ENST00000604332 360 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 AC022217.4-201ENST00000604389 163 ntBASIC1.83□□□□□ -2.12
LRRC53A6NM62 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
LRRC53A6NM62 RNU6-324P-201ENST00000363957 106 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 RNA5SP363-201ENST00000365072 115 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 RNA5SP126-201ENST00000365092 109 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 Y_RNA.455-201ENST00000384230 98 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 RNU4-30P-201ENST00000410245 143 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.82□□□□□ -2.12
LRRC53A6NM62 SUMO1P2-201ENST00000452524 304 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 RPS26P55-201ENST00000471178 356 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.82□□□□□ -2.12
LRRC53A6NM62 RNU6-436P-201ENST00000516171 114 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 RNU7-110P-201ENST00000516891 62 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 RNU6-897P-201ENST00000517135 105 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.82□□□□□ -2.12
LRRC53A6NM62 AC136932.1-201ENST00000574771 208 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 AC113195.1-201ENST00000579952 141 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 AC011373.1-201ENST00000607270 237 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 AC103810.8-201ENST00000607347 118 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
LRRC53A6NM62 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.82□□□□□ -2.12
LRRC53A6NM62 Y_RNA.331-201ENST00000365267 102 ntBASIC1.81□□□□□ -2.12
LRRC53A6NM62 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.81□□□□□ -2.12
LRRC53A6NM62 SNORD63-201ENST00000384262 68 ntBASIC1.81□□□□□ -2.12
LRRC53A6NM62 RNU6-505P-201ENST00000384427 107 ntBASIC1.81□□□□□ -2.12
LRRC53A6NM62 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
LRRC53A6NM62 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.81□□□□□ -2.12
LRRC53A6NM62 AC005042.3-201ENST00000453230 174 ntBASIC1.81□□□□□ -2.12
LRRC53A6NM62 AC010655.3-201ENST00000478818 450 ntBASIC1.81□□□□□ -2.12
LRRC53A6NM62 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.81□□□□□ -2.12
LRRC53A6NM62 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LRRC53A6NM62 AL356292.1-201ENST00000283110 373 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 SNORD114-7-201ENST00000362520 77 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 SNORD81.1-201ENST00000363064 77 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 RNU6-117P-201ENST00000365415 107 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.8□□□□□ -2.12
LRRC53A6NM62 RNU6-639P-201ENST00000384074 107 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 SNORA70B-201ENST00000384210 135 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 RPL21P1-201ENST00000399532 476 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.8□□□□□ -2.12
LRRC53A6NM62 RNU6-63P-201ENST00000516690 95 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.8□□□□□ -2.12
LRRC53A6NM62 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.8□□□□□ -2.12
LRRC53A6NM62 AC116312.1-201ENST00000606841 314 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 AC127459.3-201ENST00000624328 466 ntBASIC1.8□□□□□ -2.12
LRRC53A6NM62 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LRRC53A6NM62 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LRRC53A6NM62 SNORD114-1-201ENST00000362705 72 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 Y_RNA.183-201ENST00000363882 113 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 Y_RNA.326-201ENST00000365176 113 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 Y_RNA.329-201ENST00000365209 107 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 Y_RNA.380-201ENST00000365663 111 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 RPL23AP36-201ENST00000413895 458 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 AL390729.2-201ENST00000416137 156 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 UBL5P3-201ENST00000475112 231 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 HMGB3P17-201ENST00000504195 649 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 RNU6-1337P-201ENST00000516525 95 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 RNA5SP481-201ENST00000516814 122 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 MIR4300-201ENST00000581016 96 ntBASIC1.79□□□□□ -2.12
LRRC53A6NM62 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.79□□□□□ -2.12
LRRC53A6NM62 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms