Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MIR4727-201ENST00000622232 55 ntBASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 RNU6-136P-201ENST00000384663 107 ntBASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 Y_RNA.572-201ENST00000384757 98 ntBASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 RNA5SP323-201ENST00000391094 133 ntBASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 AL138878.1-201ENST00000405131 347 ntBASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 CST9LP2-201ENST00000437612 320 ntBASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 RNU1-142P-201ENST00000516682 145 ntBASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 MIR3910-1-201ENST00000580936 111 ntBASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM88BA6NKF7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 RNU1-96P-201ENST00000364163 162 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 SNORD56.5-201ENST00000364281 72 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 RNU6-1072P-201ENST00000384703 107 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 RNU6-443P-201ENST00000384780 107 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 MIR15B-201ENST00000385045 98 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 RN7SL93P-201ENST00000463035 293 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 RNU6-1041P-201ENST00000516254 102 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 RNU6-453P-201ENST00000516819 85 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 RN7SKP282-201ENST00000516824 299 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 MTND5P41-201ENST00000517498 206 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 DEFB122-202ENST00000569013 197 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 AC096644.4-201ENST00000563417 2912 ntBASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM88BA6NKF7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 MIR340-201ENST00000362125 95 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 Y_RNA.400-201ENST00000383963 111 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 MIR29C-201ENST00000385231 88 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 RNU6-482P-201ENST00000391068 107 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 UBBP3-201ENST00000445497 241 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 RNU7-94P-201ENST00000459576 63 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 SCARNA8-201ENST00000515924 131 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 AC011604.1-201ENST00000545978 196 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 AC004832.5-201ENST00000608677 401 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 JPX_2.1-201ENST00000614161 69 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 AC132825.6-201ENST00000638861 357 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 AC068700.1-201ENST00000565862 3754 ntBASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
TMEM88BA6NKF7 ZNF658B-202ENST00000615961 3375 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 AC245060.5-201ENST00000610778 3293 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 Y_RNA.203-201ENST00000364106 102 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 RNU6-1080P-201ENST00000383982 107 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 SNORA67.4-201ENST00000384688 142 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 RN7SKP101-201ENST00000411376 320 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 RPS4XP11-201ENST00000446897 772 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 RNU6-126P-201ENST00000516685 103 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 MIR3126-201ENST00000577443 74 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 AC073413.2-201ENST00000604332 360 ntBASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.49□□□□□ -1.85
TMEM88BA6NKF7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 RNA5SP68-201ENST00000363885 119 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 RNU6-704P-201ENST00000364162 103 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 RNU6-643P-201ENST00000384018 107 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 Y_RNA.488-201ENST00000384403 102 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 SNORA3.2-201ENST00000408221 125 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 AC006461.1-201ENST00000412637 326 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 AC108210.2-201ENST00000503681 201 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 MIR2114-201ENST00000516645 80 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 RNU6-1096P-201ENST00000517089 102 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 AC024995.1-201ENST00000523014 93 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 DNAJC19P2-201ENST00000593340 302 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 Y_RNA.778-201ENST00000620203 90 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 MIR338-201ENST00000636369 67 ntBASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
TMEM88BA6NKF7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 RNU6-859P-201ENST00000362728 107 ntBASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 RNU1-91P-201ENST00000364746 163 ntBASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 MT-TT-201ENST00000387460 66 ntBASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 SNORA11.4-201ENST00000408823 129 ntBASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 Y_RNA.621-201ENST00000411065 96 ntBASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 RNU2-55P-201ENST00000411146 174 ntBASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 MIR6817-201ENST00000615588 66 ntBASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TMEM88BA6NKF7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms