Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHB11Q9Y5F2 SNORA62.6-201ENST00000606322 83 ntBASIC3.65□□□□□ -1.83
PCDHB11Q9Y5F2 AC242852.1-201ENST00000612151 96 ntBASIC3.65□□□□□ -1.83
PCDHB11Q9Y5F2 AC244015.1-201ENST00000622301 99 ntBASIC3.65□□□□□ -1.83
PCDHB11Q9Y5F2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB11Q9Y5F2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB11Q9Y5F2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
PCDHB11Q9Y5F2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 AC018630.2-201ENST00000534866 2403 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 Y_RNA.85-201ENST00000363014 111 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 MIR548A2-201ENST00000384956 97 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 MIR183-201ENST00000384958 110 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 RN7SL293P-201ENST00000481765 281 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 COX6CP6-201ENST00000490840 228 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 AC011406.1-201ENST00000512440 370 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 Y_RNA.666-201ENST00000516187 112 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 RNU6-1291P-201ENST00000516591 104 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 SCARNA15-202ENST00000516881 127 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 SNORA48.11-201ENST00000517015 89 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 AC024614.2-201ENST00000577584 372 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 AC087685.1-201ENST00000587507 141 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 CEP170P1-201ENST00000502249 4587 ntBASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PCDHB11Q9Y5F2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 SNORD12C-201ENST00000386307 89 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 RNA5SP424-201ENST00000390988 115 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 SNORD77.3-201ENST00000391113 65 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 RNU2-48P-201ENST00000410694 191 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 AC017083.1-201ENST00000428093 483 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 SNRPGP13-201ENST00000442212 177 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 CKS1BP2-201ENST00000497342 240 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 RNU6-693P-201ENST00000516134 107 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 SCARNA13-201ENST00000516672 275 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 RN7SKP282-201ENST00000516824 299 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 RN7SKP209-201ENST00000516888 304 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 AL358944.1-201ENST00000528537 144 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 MIR5195-201ENST00000583555 115 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 AC244505.7-201ENST00000599675 272 ntBASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PCDHB11Q9Y5F2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 RNY4P30-201ENST00000410216 95 ntBASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 SEM1P1-201ENST00000506694 209 ntBASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 RN7SKP83-201ENST00000516512 178 ntBASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 RNU6-341P-201ENST00000516973 96 ntBASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 AC068657.1-201ENST00000520807 306 ntBASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 AL356280.1-201ENST00000603614 379 ntBASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 AL137067.1-201ENST00000615933 120 ntBASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 MIR6079-201ENST00000635807 62 ntBASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PCDHB11Q9Y5F2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 RNU6-766P-201ENST00000362478 107 ntBASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 Y_RNA.366-201ENST00000365540 102 ntBASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 AL138878.1-201ENST00000405131 347 ntBASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 SNORD105B-201ENST00000458770 79 ntBASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 AL359075.3-201ENST00000613288 217 ntBASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 U6.105-201ENST00000637379 88 ntBASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB11Q9Y5F2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 RNA5SP50-201ENST00000363731 107 ntBASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 SNORA68.1-201ENST00000364537 132 ntBASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 MIR518F-201ENST00000384973 87 ntBASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 Y_RNA.714-201ENST00000517065 90 ntBASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 MIR7975-201ENST00000619350 68 ntBASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 AC009831.4-201ENST00000620744 325 ntBASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHB11Q9Y5F2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 Y_RNA.163-201ENST00000363702 113 ntBASIC3.59□□□□□ -1.83
PCDHB11Q9Y5F2 CD24P4-201ENST00000382840 243 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms