Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
PPARGC1AQ9UBK2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 RNU1-23P-201ENST00000363361 144 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-275P-201ENST00000364910 107 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 MIR518C-201ENST00000384822 101 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 Y_RNA.580-201ENST00000391004 95 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 RNU2-2P-201ENST00000410396 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 MTCO1P44-201ENST00000441935 243 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 RNA5SP20-201ENST00000515976 84 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 RNU7-115P-201ENST00000516433 55 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 AC021269.2-201ENST00000532318 330 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 MIR3133-201ENST00000583157 78 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 AL355297.2-201ENST00000604792 129 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 RNU2-4P-201ENST00000606190 192 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.15-201ENST00000611544 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 AL391903.3-201ENST00000612158 163 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.16-201ENST00000613119 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.12-201ENST00000613778 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.9-201ENST00000615427 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.11-201ENST00000616345 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.2-201ENST00000616535 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.3-201ENST00000617785 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.19-201ENST00000618602 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 RNU2-1-201ENST00000618664 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.6-201ENST00000619225 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.5-201ENST00000619465 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 U2.10-201ENST00000620268 191 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 AL137790.1-201ENST00000634283 177 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 CENPCP1-201ENST00000533085 2578 ntBASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PPARGC1AQ9UBK2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 Y_RNA.412-201ENST00000384001 104 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-418P-201ENST00000384035 107 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 RNU2-48P-201ENST00000410694 191 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 HMGN2P35-201ENST00000412164 270 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 EBAG9P1-201ENST00000418955 543 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 RNA5SP367-201ENST00000516557 118 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-856P-201ENST00000516959 98 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 EIF4BP1-201ENST00000554881 351 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 AP003357.1-201ENST00000604497 148 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 AC004832.4-201ENST00000608952 331 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 AC013412.1-201ENST00000610687 192 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 MTND1P7-201ENST00000632801 297 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 AC021753.1-201ENST00000635724 168 ntBASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
PPARGC1AQ9UBK2 MIR26A1-201ENST00000362205 77 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 Y_RNA.182-201ENST00000363880 111 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-1048P-201ENST00000364054 107 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 Y_RNA.272-201ENST00000364696 102 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-407P-201ENST00000365280 104 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 SNORD50.2-201ENST00000365465 70 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 MIR616-201ENST00000385293 97 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 RNU5E-9P-201ENST00000411164 104 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 AC016909.1-201ENST00000415916 166 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 HSPE1P21-201ENST00000438283 308 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 RPL39P40-201ENST00000445481 146 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 AC091826.1-201ENST00000514065 313 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 SNORA4.4-201ENST00000515921 135 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 RNU7-200P-201ENST00000516105 62 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 PRELID2P1-201ENST00000552837 301 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 LARP7P3-201ENST00000579888 337 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 MIR4744-201ENST00000581563 82 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 AC005972.2-201ENST00000604690 348 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.88□□□□□ -1.95
PPARGC1AQ9UBK2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 AC068700.1-201ENST00000565862 3754 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-774P-201ENST00000363238 107 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 NDUFB4P4-201ENST00000404822 243 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 COTL1P1-201ENST00000422309 375 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 SUMO1P4-201ENST00000429430 302 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 AP001486.1-201ENST00000463339 476 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 Y_RNA.797-201ENST00000515977 94 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 MIR4724-201ENST00000579485 89 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 MIR3605-201ENST00000583214 100 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 ELOCP29-201ENST00000588193 334 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 U4atac.1-201ENST00000618345 95 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 AC068647.2-201ENST00000637380 353 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 AC009487.2-201ENST00000420969 6821 ntBASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.87□□□□□ -1.95
PPARGC1AQ9UBK2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 MIR367-201ENST00000362299 68 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 Y_RNA.172-201ENST00000363765 102 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 SNORA80A-201ENST00000363922 136 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 RNU4-84P-201ENST00000364200 139 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 RNU6-117P-201ENST00000365415 107 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 Y_RNA.357-201ENST00000365487 109 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 SRIP3-201ENST00000413200 219 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 AL135786.1-201ENST00000415892 214 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 AC087499.2-201ENST00000432861 149 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 AC003982.1-202ENST00000469928 248 ntBASIC2.86□□□□□ -1.95
PPARGC1AQ9UBK2 SNORA9.3-201ENST00000516383 129 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 828 ms