Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.15□□□□□ -2.23
NPAS2Q99743 TPTEP1-208ENST00000636884 213 ntBASIC1.15□□□□□ -2.23
NPAS2Q99743 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NPAS2Q99743 RNA5SP327-201ENST00000362494 101 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 RNY1P16-201ENST00000363063 111 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 RNU6-137P-201ENST00000363680 108 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 Y_RNA.179-201ENST00000363844 90 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 RNU6-1283P-201ENST00000365314 105 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 Y_RNA.490-201ENST00000384413 102 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 SNORA75.4-201ENST00000391278 119 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
NPAS2Q99743 RPL21P1-201ENST00000399532 476 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 MIR190B-201ENST00000401119 79 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 RNU6-1001P-201ENST00000411265 100 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.14□□□□□ -2.23
NPAS2Q99743 snoU13.18-201ENST00000459483 104 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 RPL31P58-201ENST00000469001 379 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 RNU6-1114P-201ENST00000516022 107 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 Y_RNA.691-201ENST00000516611 103 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 AC093023.1-201ENST00000547375 507 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.14□□□□□ -2.23
NPAS2Q99743 MIR4452-201ENST00000583004 71 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 AC125232.2-201ENST00000592457 143 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 AC073413.2-201ENST00000604332 360 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 PISRT1.1-201ENST00000616930 107 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 AL669831.3-213ENST00000636676 183 ntBASIC1.14□□□□□ -2.23
NPAS2Q99743 RNU1-22P-201ENST00000363334 158 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 RNU6-280P-201ENST00000364145 104 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 RNU6-1240P-201ENST00000365155 104 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 RNU6-281P-201ENST00000384212 103 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
NPAS2Q99743 RNA5SP467-201ENST00000391274 118 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 RNU1-139P-201ENST00000391307 165 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 RNU6-370P-201ENST00000411008 104 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 RPL23AP50-201ENST00000434149 455 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 RPS27P1-201ENST00000450552 247 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.13□□□□□ -2.23
NPAS2Q99743 AC093303.1-201ENST00000514549 295 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 RNU1-142P-201ENST00000516682 145 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 AC091144.1-201ENST00000519573 138 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 AC105029.1-201ENST00000520250 669 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 MIR3664-201ENST00000579074 99 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 AC010999.1-201ENST00000611856 324 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 AC021506.2-201ENST00000612354 169 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 AL359075.3-201ENST00000613288 217 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 AC022306.2-201ENST00000617563 647 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
NPAS2Q99743 AC099654.5-201ENST00000636479 350 ntBASIC1.13□□□□□ -2.23
NPAS2Q99743 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
NPAS2Q99743 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
NPAS2Q99743 RNA5SP361-201ENST00000362686 118 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 Y_RNA.166-201ENST00000363730 102 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 SNORD114-22-201ENST00000365423 72 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 RNA5SP259-201ENST00000365541 109 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 SNORA70.7-201ENST00000384159 133 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 Y_RNA.557-201ENST00000384680 107 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 RNA5SP109-201ENST00000391010 116 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 RNU6-700P-201ENST00000391043 107 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 MIR1185-2-201ENST00000408687 86 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 AC138393.2-201ENST00000414742 246 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.12□□□□□ -2.23
NPAS2Q99743 AC092423.1-201ENST00000430165 186 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.12□□□□□ -2.23
NPAS2Q99743 NDUFB4P10-201ENST00000452541 359 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 AC093852.1-201ENST00000503587 266 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 AC116353.2-201ENST00000505332 712 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 RNU6-107P-201ENST00000516643 102 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 RN7SKP88-201ENST00000516847 250 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 SNORA20.3-201ENST00000516880 132 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.12□□□□□ -2.23
NPAS2Q99743 FRG2DP-202ENST00000566967 323 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 AL929325.1-201ENST00000603096 117 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 7SK.8-201ENST00000612110 250 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 MIR1244-1-201ENST00000612829 85 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.12□□□□□ -2.23
NPAS2Q99743 AL357075.2-201ENST00000614906 189 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 7SK.11-201ENST00000615477 250 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 7SK.13-201ENST00000622040 250 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.12□□□□□ -2.23
NPAS2Q99743 MIR1244-3-201ENST00000635744 85 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 MIR1244-2-201ENST00000636449 85 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 MIR1244-4-202ENST00000636813 85 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 AC099654.14-201ENST00000638599 341 ntBASIC1.12□□□□□ -2.23
NPAS2Q99743 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
NPAS2Q99743 MIR96-201ENST00000362288 78 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 U3.8-201ENST00000363675 217 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 Y_RNA.358-201ENST00000365491 99 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 RNY1P14-201ENST00000384426 108 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 RNU6-1031P-201ENST00000384773 107 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 Y_RNA.646-201ENST00000410980 101 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.11□□□□□ -2.23
NPAS2Q99743 EIF1P2-201ENST00000428233 350 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 TOMM22P2-201ENST00000430735 237 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 AC005002.2-201ENST00000438228 269 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.11□□□□□ -2.23
NPAS2Q99743 PGBD4P5-201ENST00000445958 426 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 MTND4P18-201ENST00000447010 465 ntBASIC1.11□□□□□ -2.23
NPAS2Q99743 Y_RNA.635-201ENST00000459041 101 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms