Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN4AP35499 MIR8054-201ENST00000620877 86 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.92□□□□□ -2.26
SCN4AP35499 RNU6-1305P-201ENST00000364353 104 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 Y_RNA.404-201ENST00000383978 102 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 AL117342.1-201ENST00000404861 406 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 RNU6-57P-201ENST00000411348 103 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN4AP35499 AC010154.1-201ENST00000425857 269 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN4AP35499 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.92□□□□□ -2.26
SCN4AP35499 AC025465.3-201ENST00000510570 311 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 MIR3937-201ENST00000580135 106 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.92□□□□□ -2.26
SCN4AP35499 MTND5P16-201ENST00000460269 1703 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 Y_RNA.6-201ENST00000362350 114 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 RNU1-76P-201ENST00000362903 159 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 RNU6-271P-201ENST00000363858 105 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 RNU6-99P-201ENST00000364721 107 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.91□□□□□ -2.26
SCN4AP35499 MIR487A-201ENST00000385009 80 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 SNORA48.1-201ENST00000390879 135 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 MIR891A-201ENST00000401237 79 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 MTND3P8-201ENST00000412909 339 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 AL161935.2-201ENST00000414627 60 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 MTND1P2-201ENST00000430604 821 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 HSPE1P13-201ENST00000451143 297 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 Y_RNA.706-201ENST00000516933 99 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 RNA5SP437-201ENST00000517249 129 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.91□□□□□ -2.26
SCN4AP35499 AC013244.2-201ENST00000603396 103 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 AC006380.1-201ENST00000603598 186 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.91□□□□□ -2.26
SCN4AP35499 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.91□□□□□ -2.26
SCN4AP35499 SNORA75.4-201ENST00000391278 119 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 MTCYBP4-201ENST00000401524 249 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.9□□□□□ -2.27
SCN4AP35499 MIR1277-201ENST00000408536 78 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 HMGN2P34-201ENST00000437647 269 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 snoU13.6-201ENST00000458785 104 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 AC103851.1-201ENST00000506833 274 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 RNU1-54P-201ENST00000517181 120 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.9□□□□□ -2.27
SCN4AP35499 AC026470.2-201ENST00000561492 181 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 SNORA77B-201ENST00000578179 125 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 AC009229.3-201ENST00000608056 282 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 AL078596.1-201ENST00000624856 447 ntBASIC0.9□□□□□ -2.27
SCN4AP35499 MIR424-201ENST00000362227 98 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 SNORD33-201ENST00000362761 85 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 SNORD87-201ENST00000364849 89 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 Y_RNA.358-201ENST00000365491 99 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 RNU6-968P-201ENST00000384076 107 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 RNU6-296P-201ENST00000384608 107 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 RNU6-700P-201ENST00000391043 107 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 MIR548F1-201ENST00000408667 84 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.89□□□□□ -2.27
SCN4AP35499 HSPE1P21-201ENST00000438283 308 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 MTND1P17-201ENST00000448961 204 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC069439.1-201ENST00000494739 167 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC010469.2-201ENST00000496412 480 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC097462.1-201ENST00000514125 324 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC093303.1-201ENST00000514549 295 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC025647.1-201ENST00000517879 253 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.89□□□□□ -2.27
SCN4AP35499 AC090617.3-201ENST00000573670 475 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.89□□□□□ -2.27
SCN4AP35499 AC012557.2-201ENST00000605919 418 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC005562.2-201ENST00000618264 111 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SCN4AP35499 SNORD114-7-201ENST00000362520 77 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 MTND1P34-201ENST00000438556 671 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 Z98949.2-201ENST00000440996 144 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC026782.1-201ENST00000512952 449 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 RNU6-1314P-201ENST00000517139 104 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.89□□□□□ -2.27
SCN4AP35499 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.89□□□□□ -2.27
SCN4AP35499 AC010999.1-201ENST00000611856 324 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 AC006435.5-201ENST00000624486 112 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 U6.108-201ENST00000637764 58 ntBASIC0.89□□□□□ -2.27
SCN4AP35499 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SCN4AP35499 Y_RNA.319-201ENST00000365138 92 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 SNORA69.1-201ENST00000390904 137 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 AL356776.1-201ENST00000406574 447 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 RPL37P10-201ENST00000412884 288 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 EIF1P1-201ENST00000421436 341 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 EIF1P2-201ENST00000428233 350 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.88□□□□□ -2.27
SCN4AP35499 AL135790.2-201ENST00000437701 267 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 RPS26P45-201ENST00000471748 340 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 RNA5SP395-201ENST00000516567 118 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 RNU6-902P-201ENST00000517212 91 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 AC093023.1-201ENST00000547375 507 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 SNORA59B-202ENST00000578183 701 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 MIR4438-201ENST00000585271 93 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 AC021506.2-201ENST00000612354 169 ntBASIC0.88□□□□□ -2.27
SCN4AP35499 U6.73-201ENST00000619194 103 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 223 ms