Protein–RNA interactions for Protein: P28908

TNFRSF8, Tumor necrosis factor receptor superfamily member 8, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8P28908 MIR549A-201ENST00000385268 96 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 CBX3P9-201ENST00000402326 552 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 RNA5SP338-201ENST00000410495 85 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 RNU6-651P-201ENST00000411040 105 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 RNU4-61P-201ENST00000411243 107 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 Y_RNA.626-201ENST00000411288 95 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 RNA5SP270-201ENST00000411361 118 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFRSF8P28908 AL356320.1-201ENST00000429616 163 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFRSF8P28908 MTCO1P5-201ENST00000433573 344 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.34□□□□□ -2.03
TNFRSF8P28908 Y_RNA.650-201ENST00000459002 102 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 RNU7-120P-201ENST00000459334 63 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 AC091179.3-201ENST00000474761 144 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 RNU6-966P-201ENST00000516479 104 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 SNORA27.4-201ENST00000516650 95 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 Y_RNA.777-201ENST00000516982 102 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 AC018448.1-201ENST00000552843 316 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 MIR3923-201ENST00000579521 83 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 Y_RNA.771-201ENST00000598668 102 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 Y_RNA.789-201ENST00000622480 102 ntBASIC2.34□□□□□ -2.03
TNFRSF8P28908 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.34□□□□□ -2.04
TNFRSF8P28908 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TNFRSF8P28908 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNFRSF8P28908 RNU1-91P-201ENST00000364746 163 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 Y_RNA.292-201ENST00000364904 97 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 Y_RNA.331-201ENST00000365267 102 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 RNU6-793P-201ENST00000384233 104 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 RNU6-378P-201ENST00000384324 107 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 Y_RNA.793-201ENST00000411222 111 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 RNU6-1199P-201ENST00000411249 104 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.33□□□□□ -2.04
TNFRSF8P28908 AC104332.1-201ENST00000440471 797 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 AC091959.1-201ENST00000495857 238 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.33□□□□□ -2.04
TNFRSF8P28908 SNORD116-28-201ENST00000516123 91 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 CYCSP26-201ENST00000534107 320 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 AC026470.2-201ENST00000561492 181 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 MIR4498-201ENST00000577599 66 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 MIR5694-201ENST00000581190 76 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 RPL30P11-203ENST00000598995 310 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 AP000942.3-201ENST00000603702 160 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 AL034555.1-201ENST00000604816 211 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 AC037487.3-201ENST00000606668 112 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 PCGEM1.1-201ENST00000613431 131 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 AC009831.4-201ENST00000620744 325 ntBASIC2.33□□□□□ -2.04
TNFRSF8P28908 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNFRSF8P28908 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFRSF8P28908 SNORA25.1-201ENST00000362326 128 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 RNU4-15P-201ENST00000362613 141 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 RNU6-655P-201ENST00000362858 107 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 Y_RNA.101-201ENST00000363154 102 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 Y_RNA.270-201ENST00000364693 104 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 Y_RNA.383-201ENST00000383855 97 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 Y_RNA.464-201ENST00000384282 110 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 MIR208B-201ENST00000401172 77 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 RPL23AP3-201ENST00000453844 468 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 SNORD2.1-201ENST00000458762 69 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 AC107393.1-201ENST00000512403 346 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 RNU6-586P-201ENST00000517265 104 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 AP002001.1-203ENST00000534002 267 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFRSF8P28908 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFRSF8P28908 AC006001.4-201ENST00000622243 395 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFRSF8P28908 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TNFRSF8P28908 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.32□□□□□ -2.04
TNFRSF8P28908 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TNFRSF8P28908 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TNFRSF8P28908 RNU6-682P-201ENST00000363843 106 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 RNU4-56P-201ENST00000364700 142 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 RNA5SP138-201ENST00000365098 114 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 MIR489-201ENST00000384923 84 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 MIR186-201ENST00000384988 86 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 MIR548M-201ENST00000408260 86 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 RNU2-61P-201ENST00000411069 191 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 RAB28P5-201ENST00000427490 651 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.31□□□□□ -2.04
TNFRSF8P28908 POLR2KP2-201ENST00000438155 177 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 UQCRBP2-201ENST00000447827 297 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 MRPS10P1-201ENST00000448483 130 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 RPL23AP7-203ENST00000449021 469 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 AC005042.3-201ENST00000453230 174 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 RNU6-625P-201ENST00000459412 107 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 AC025033.1-201ENST00000463883 194 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 RPL23AP42-201ENST00000471152 471 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 RNU6-1212P-201ENST00000517023 104 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 RPL21P9-201ENST00000556149 474 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.31□□□□□ -2.04
TNFRSF8P28908 AC026271.5-201ENST00000577873 130 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 Z83818.1-201ENST00000603584 150 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 SNRPGP20-201ENST00000604477 205 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 AC004467.1-201ENST00000615678 330 ntBASIC2.31□□□□□ -2.04
TNFRSF8P28908 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TNFRSF8P28908 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms