Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 SNORD116-15-201ENST00000384445 92 ntBASIC3.06□□□□□ -1.92
SYPP08247 SNORD116-19-201ENST00000384729 92 ntBASIC3.06□□□□□ -1.92
SYPP08247 U6atac.2-201ENST00000408644 118 ntBASIC3.06□□□□□ -1.92
SYPP08247 RNA5SP511-201ENST00000410487 115 ntBASIC3.06□□□□□ -1.92
SYPP08247 RNA5SP229-201ENST00000410809 99 ntBASIC3.06□□□□□ -1.92
SYPP08247 AC008134.1-201ENST00000420943 193 ntBASIC3.06□□□□□ -1.92
SYPP08247 RPS27P1-201ENST00000450552 247 ntBASIC3.06□□□□□ -1.92
SYPP08247 HMGN1P18-201ENST00000457642 277 ntBASIC3.06□□□□□ -1.92
SYPP08247 AC021205.2-201ENST00000480069 347 ntBASIC3.06□□□□□ -1.92
SYPP08247 RNU6-1333P-201ENST00000516162 93 ntBASIC3.06□□□□□ -1.92
SYPP08247 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.06□□□□□ -1.92
SYPP08247 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.06□□□□□ -1.92
SYPP08247 AC015720.1-201ENST00000565251 277 ntBASIC3.06□□□□□ -1.92
SYPP08247 MIR1248-201ENST00000629190 106 ntBASIC3.06□□□□□ -1.92
SYPP08247 MIR6844-201ENST00000637122 62 ntBASIC3.06□□□□□ -1.92
SYPP08247 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SYPP08247 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SYPP08247 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SYPP08247 CENPCP1-201ENST00000533085 2578 ntBASIC3.05□□□□□ -1.92
SYPP08247 MIR22-201ENST00000362190 85 ntBASIC3.05□□□□□ -1.92
SYPP08247 MIR148B-201ENST00000362252 99 ntBASIC3.05□□□□□ -1.92
SYPP08247 Y_RNA.521-201ENST00000384560 114 ntBASIC3.05□□□□□ -1.92
SYPP08247 RNA5SP496-201ENST00000391240 109 ntBASIC3.05□□□□□ -1.92
SYPP08247 Y_RNA.622-201ENST00000411091 108 ntBASIC3.05□□□□□ -1.92
SYPP08247 HMGN2P18-201ENST00000450680 270 ntBASIC3.05□□□□□ -1.92
SYPP08247 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.05□□□□□ -1.92
SYPP08247 SNRPGP8-201ENST00000454064 226 ntBASIC3.05□□□□□ -1.92
SYPP08247 RNU6-1211P-201ENST00000459179 105 ntBASIC3.05□□□□□ -1.92
SYPP08247 AC090515.1-201ENST00000465295 476 ntBASIC3.05□□□□□ -1.92
SYPP08247 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.05□□□□□ -1.92
SYPP08247 AC091826.1-201ENST00000514065 313 ntBASIC3.05□□□□□ -1.92
SYPP08247 RNU2-34P-201ENST00000516534 121 ntBASIC3.05□□□□□ -1.92
SYPP08247 RNU6-965P-201ENST00000516721 96 ntBASIC3.05□□□□□ -1.92
SYPP08247 SCARNA3-201ENST00000517097 143 ntBASIC3.05□□□□□ -1.92
SYPP08247 AL021707.8-201ENST00000609428 183 ntBASIC3.05□□□□□ -1.92
SYPP08247 AC090115.4-201ENST00000609970 188 ntBASIC3.05□□□□□ -1.92
SYPP08247 AC013412.1-201ENST00000610687 192 ntBASIC3.05□□□□□ -1.92
SYPP08247 TUG1_4.1-201ENST00000619464 181 ntBASIC3.05□□□□□ -1.92
SYPP08247 MIR7157-201ENST00000635801 60 ntBASIC3.05□□□□□ -1.92
SYPP08247 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SYPP08247 MIR7515-201ENST00000637837 67 ntBASIC3.05□□□□□ -1.92
SYPP08247 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
SYPP08247 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SYPP08247 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SYPP08247 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SYPP08247 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SYPP08247 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SYPP08247 RNU6-438P-201ENST00000365561 103 ntBASIC3.04□□□□□ -1.92
SYPP08247 RNU6-805P-201ENST00000365643 106 ntBASIC3.04□□□□□ -1.92
SYPP08247 CD24P4-201ENST00000382840 243 ntBASIC3.04□□□□□ -1.92
SYPP08247 MIR218-1-201ENST00000384999 110 ntBASIC3.04□□□□□ -1.92
SYPP08247 RNU6-460P-201ENST00000391158 108 ntBASIC3.04□□□□□ -1.92
SYPP08247 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.04□□□□□ -1.92
SYPP08247 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.04□□□□□ -1.92
SYPP08247 SNORA64.4-201ENST00000516632 81 ntBASIC3.04□□□□□ -1.92
SYPP08247 RNU6-1234P-201ENST00000516877 103 ntBASIC3.04□□□□□ -1.92
SYPP08247 AC068657.1-201ENST00000520807 306 ntBASIC3.04□□□□□ -1.92
SYPP08247 AC093331.1-201ENST00000521474 169 ntBASIC3.04□□□□□ -1.92
SYPP08247 AC104027.1-201ENST00000521887 300 ntBASIC3.04□□□□□ -1.92
SYPP08247 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
SYPP08247 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.04□□□□□ -1.92
SYPP08247 AC105245.1-201ENST00000581934 244 ntBASIC3.04□□□□□ -1.92
SYPP08247 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.04□□□□□ -1.92
SYPP08247 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
SYPP08247 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
SYPP08247 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
SYPP08247 RNY1P11-201ENST00000363759 113 ntBASIC3.03□□□□□ -1.92
SYPP08247 Y_RNA.251-201ENST00000364551 99 ntBASIC3.03□□□□□ -1.92
SYPP08247 Y_RNA.273-201ENST00000364703 102 ntBASIC3.03□□□□□ -1.92
SYPP08247 RNU6-1240P-201ENST00000365155 104 ntBASIC3.03□□□□□ -1.92
SYPP08247 SNORA54-201ENST00000384281 123 ntBASIC3.03□□□□□ -1.92
SYPP08247 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SYPP08247 RNU6-588P-201ENST00000410281 105 ntBASIC3.03□□□□□ -1.92
SYPP08247 AC010154.1-201ENST00000425857 269 ntBASIC3.03□□□□□ -1.92
SYPP08247 AC009969.1-201ENST00000438726 172 ntBASIC3.03□□□□□ -1.92
SYPP08247 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.03□□□□□ -1.92
SYPP08247 MIR3199-1-201ENST00000582434 88 ntBASIC3.03□□□□□ -1.92
SYPP08247 AC104984.5-201ENST00000586878 94 ntBASIC3.03□□□□□ -1.92
SYPP08247 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.03□□□□□ -1.92
SYPP08247 AP001340.1-201ENST00000624405 217 ntBASIC3.03□□□□□ -1.92
SYPP08247 AL136360.1-201ENST00000503377 1900 ntBASIC3.03□□□□□ -1.92
SYPP08247 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
SYPP08247 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SYPP08247 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SYPP08247 RNU4-41P-201ENST00000364426 143 ntBASIC3.02□□□□□ -1.93
SYPP08247 RNU6-597P-201ENST00000365620 102 ntBASIC3.02□□□□□ -1.93
SYPP08247 RNU6-546P-201ENST00000383991 107 ntBASIC3.02□□□□□ -1.93
SYPP08247 RNU6-80P-201ENST00000384195 107 ntBASIC3.02□□□□□ -1.93
SYPP08247 RNU6-851P-201ENST00000384565 107 ntBASIC3.02□□□□□ -1.93
SYPP08247 MIR181A2-201ENST00000384863 110 ntBASIC3.02□□□□□ -1.93
SYPP08247 RNU1-101P-201ENST00000391171 127 ntBASIC3.02□□□□□ -1.93
SYPP08247 Y_RNA.587-201ENST00000391210 103 ntBASIC3.02□□□□□ -1.93
SYPP08247 SNORA75.5-201ENST00000391291 81 ntBASIC3.02□□□□□ -1.93
SYPP08247 AL512604.1-201ENST00000404812 257 ntBASIC3.02□□□□□ -1.93
SYPP08247 RNA5SP184-201ENST00000411071 108 ntBASIC3.02□□□□□ -1.93
SYPP08247 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SYPP08247 TRIAP1P1-201ENST00000427062 225 ntBASIC3.02□□□□□ -1.93
SYPP08247 AL139132.1-201ENST00000431587 344 ntBASIC3.02□□□□□ -1.93
SYPP08247 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.02□□□□□ -1.93
SYPP08247 RPS27P22-201ENST00000478056 241 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 300.9 ms