Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU6-1198P-201ENST00000516904 67 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 RNU6-897P-201ENST00000517135 105 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 MIR2355-201ENST00000517199 87 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 AC136932.1-201ENST00000574771 208 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 AC104984.5-201ENST00000586878 94 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.51□□□□□ -2.17
HDAC3O15379 AL390123.1-201ENST00000603216 237 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 U1.36-201ENST00000620684 176 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.51□□□□□ -2.17
HDAC3O15379 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HDAC3O15379 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
HDAC3O15379 RNU1-62P-201ENST00000362599 164 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 SNORD115-3-201ENST00000363100 82 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 RNU6-280P-201ENST00000364145 104 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 Y_RNA.214-201ENST00000364201 112 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 SNORD114-6-201ENST00000364393 72 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 RNU6-1164P-201ENST00000364428 107 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 SNORD14D-201ENST00000384390 87 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 Y_RNA.551-201ENST00000384661 102 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 SNORD78.2-201ENST00000391076 69 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 RPL21P1-201ENST00000399532 476 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 AL357139.1-201ENST00000407792 426 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.5□□□□□ -2.17
HDAC3O15379 SDAD1P3-201ENST00000427380 333 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 AC016717.1-201ENST00000448918 286 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 AL137159.1-201ENST00000452808 512 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.5□□□□□ -2.17
HDAC3O15379 RNU6-966P-201ENST00000516479 104 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 Y_RNA.683-201ENST00000516508 93 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 Y_RNA.721-201ENST00000517207 102 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 AL117187.1-201ENST00000555482 181 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 RPS29P30-201ENST00000600975 111 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 SNORD11B-201ENST00000607707 90 ntBASIC1.5□□□□□ -2.17
HDAC3O15379 Y_RNA.64-201ENST00000362845 102 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 Y_RNA.143-201ENST00000363520 106 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 Y_RNA.222-201ENST00000364264 102 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 RNU6-1305P-201ENST00000364353 104 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 RNU4-50P-201ENST00000364361 141 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 RNU6-574P-201ENST00000384265 107 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 MIR29C-201ENST00000385231 88 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 SRIP3-201ENST00000413200 219 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.49□□□□□ -2.17
HDAC3O15379 AC139712.2-201ENST00000424302 339 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 AL591806.2-201ENST00000433122 173 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 MTCO1P44-201ENST00000441935 243 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 FCF1P4-201ENST00000448326 183 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 AC007395.1-201ENST00000451333 677 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.49□□□□□ -2.17
HDAC3O15379 RNU6-408P-201ENST00000515910 100 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 AC091144.1-201ENST00000519573 138 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.49□□□□□ -2.17
HDAC3O15379 RPL17P51-201ENST00000605218 238 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 AL162730.1-201ENST00000605734 292 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.49□□□□□ -2.17
HDAC3O15379 AC010205.1-201ENST00000616668 449 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 AL590240.4-201ENST00000616908 390 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 AC068205.3-201ENST00000636385 468 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.49□□□□□ -2.17
HDAC3O15379 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HDAC3O15379 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
HDAC3O15379 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
HDAC3O15379 RNU6-238P-201ENST00000363313 106 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 Y_RNA.380-201ENST00000365663 111 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 RNU6-418P-201ENST00000384035 107 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 RNU6-937P-201ENST00000384325 106 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 RNU6-1026P-201ENST00000384465 108 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 MIR586-201ENST00000385035 97 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 MIR548B-201ENST00000385247 97 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 MIR1283-2-201ENST00000408621 87 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 RPL21P38-201ENST00000418090 167 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 AC123900.1-201ENST00000420390 96 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 CYCSP49-201ENST00000420810 319 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 MTND3P2-201ENST00000438452 342 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 PCNPP5-201ENST00000452246 481 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 AC098869.1-201ENST00000481627 292 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 RNU6-635P-201ENST00000516651 102 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 AC008269.2-201ENST00000561915 1105 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 AL355297.3-201ENST00000604082 446 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 AL121655.1-201ENST00000605811 308 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 AC022513.1-201ENST00000624512 117 ntBASIC1.48□□□□□ -2.17
HDAC3O15379 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.48□□□□□ -2.17
HDAC3O15379 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HDAC3O15379 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HDAC3O15379 Y_RNA.99-201ENST00000363138 105 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 Y_RNA.526-201ENST00000384572 110 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 MIR215-201ENST00000384858 110 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 MIR597-201ENST00000384968 97 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 SNORA26.9-201ENST00000391322 122 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 MRPL35P1-201ENST00000404272 572 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 MIR320B2-201ENST00000408479 138 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 Y_RNA.595-201ENST00000410403 105 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 AC016909.1-201ENST00000415916 166 ntBASIC1.47□□□□□ -2.17
HDAC3O15379 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.47□□□□□ -2.17
HDAC3O15379 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.47□□□□□ -2.17
HDAC3O15379 DYNLT3P2-201ENST00000442517 295 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms