Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC007229.1-201ENST00000590455 412 ntBASIC3.59□□□□□ -1.83
TMEM88BA6NKF7 U2.20-201ENST00000613956 192 ntBASIC3.59□□□□□ -1.83
TMEM88BA6NKF7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 snoU2-30.2-201ENST00000362805 70 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 RNU6-674P-201ENST00000363831 107 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 RNU6-728P-201ENST00000365375 104 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 RNU6-117P-201ENST00000365415 107 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 RNA5SP247-201ENST00000411181 105 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 AC104389.3-201ENST00000445629 235 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 RNU1-131P-201ENST00000458943 161 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 AC018868.1-201ENST00000491307 315 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 AC011406.1-201ENST00000512440 370 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 AC007536.1-201ENST00000533382 349 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 AC015720.1-201ENST00000565251 277 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 U6.73-201ENST00000619194 103 ntBASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TMEM88BA6NKF7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 Y_RNA.229-201ENST00000364347 113 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 Y_RNA.398-201ENST00000383952 99 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 SNORD116-18-201ENST00000383961 92 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 RNU1-89P-201ENST00000384592 164 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 MIR515-2-201ENST00000384883 83 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 MIR515-1-201ENST00000384884 83 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 MIR520G-201ENST00000385064 90 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 RNU6-239P-201ENST00000390990 99 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 RNA5SP511-201ENST00000410487 115 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 AC245047.8-201ENST00000456455 284 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 RN7SL636P-201ENST00000497504 294 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 AC109810.1-201ENST00000534066 224 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 SNORD53-201ENST00000579969 78 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 MIR486-1-201ENST00000612171 68 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 U2.22-201ENST00000636441 106 ntBASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.57□□□□□ -1.84
TMEM88BA6NKF7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 RNU4-41P-201ENST00000364426 143 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 MIR613-201ENST00000385248 95 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 SNORA79-201ENST00000408376 140 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 RNU5E-9P-201ENST00000411164 104 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 AC244505.4-201ENST00000434905 287 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 AC018634.1-201ENST00000437554 401 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 AL603825.1-201ENST00000438481 80 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 SSXP5-201ENST00000443473 287 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 TMSB4XP3-201ENST00000445144 114 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 AL121914.1-201ENST00000450188 156 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 MIR3186-201ENST00000577404 85 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 AP001485.1-201ENST00000604799 199 ntBASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
TMEM88BA6NKF7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM88BA6NKF7 RNA5SP322-201ENST00000363617 119 ntBASIC3.55□□□□□ -1.84
TMEM88BA6NKF7 MIR562-201ENST00000384894 95 ntBASIC3.55□□□□□ -1.84
TMEM88BA6NKF7 AL606845.1-201ENST00000404881 255 ntBASIC3.55□□□□□ -1.84
TMEM88BA6NKF7 RNU6-383P-201ENST00000410864 94 ntBASIC3.55□□□□□ -1.84
TMEM88BA6NKF7 AC060773.1-201ENST00000421698 310 ntBASIC3.55□□□□□ -1.84
TMEM88BA6NKF7 AL359075.3-201ENST00000613288 217 ntBASIC3.55□□□□□ -1.84
TMEM88BA6NKF7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM88BA6NKF7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TMEM88BA6NKF7 SNORA38-201ENST00000363946 132 ntBASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 Y_RNA.343-201ENST00000365354 112 ntBASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 RNU6-187P-201ENST00000384139 106 ntBASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 AC090616.3-201ENST00000582184 217 ntBASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 AL353149.1-201ENST00000610667 244 ntBASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 FAM35DP-201ENST00000323387 2712 ntBASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM88BA6NKF7 FAM35CP-201ENST00000554755 2470 ntBASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 Y_RNA.337-201ENST00000365312 102 ntBASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 SNORD50.2-201ENST00000365465 70 ntBASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 RNU6-417P-201ENST00000384712 107 ntBASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 RNU6-1186P-201ENST00000410429 97 ntBASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 ATP5J2P3-201ENST00000451550 258 ntBASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 RNU7-99P-201ENST00000516271 62 ntBASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 AC107016.2-201ENST00000547968 190 ntBASIC3.53□□□□□ -1.84
TMEM88BA6NKF7 AC015712.3-201ENST00000559380 164 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms